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. 2013 Mar 16;14:185. doi: 10.1186/1471-2164-14-185

Table 1.

N. furzeri transcriptome libraries and sequencing methods

Library Specimens used for RNA-isolation Sequencing technology Number of reads Average length (bp) Total length (Mb)
1
one male GRZ, 9 weeks, whole body; normaliseda
Sanger
131,808
734
97
2
one male GRZ, 10 weeks, whole body; normaliseda
454/Roche GS-FLX
751,885
223
168
3
one male GRZ, 10 weeks, whole body
454/Roche GS-FLX
415,426
225
94
4
six male and female GRZ, 8 weeks, whole body; normalisedb
454/Roche GS-Titanium
2,351,236
369
869
5
three GRZ, 1 week, whole body
Solexa/Illumina, 2 x 150 bp
89,730,910
151
6,774
6
five male GRZ, 5 weeks, skin
Solexa/Illumina, 2 x 101 bp
55,410,042
101
5,596
 
 
Solexa/Illumina, 76 bp
33,947,044
76
2,579
7
five male GRZ, 5 weeks, brain
Solexa/Illumina, 2 x 101 bp
60,997,820
101
6,161
 
 
Solexa/Illumina, 76 bp
36,117,265
76
2,744
8
three male GRZ, 14 weeks, skin
Solexa/Illumina, 76 bp
35,963,921
76
2,733
9
three male GRZ, 14 weeks, brain
Solexa/Illumina, 76 bp
27,369,310
76
2,080
10
four male MZM-0403, 5 weeks, skin
Solexa/Illumina, 76 bp
31,727,935
76
2,411
11
five male MZM-0403, 5 weeks, brain
Solexa/Illumina, 76 bp
34,720,289
76
2,638
12
five male MZM-0403, 31 weeks, skin
Solexa/Illumina, 76 bp
30,268,649
76
2,300
13
three male MZM-0403, 31 weeks, brain
Solexa/Illumina, 76 bp
31,423,327
76
2,388
      467,676,512   39,632

aNormalisation was done by Evrogen.

bNormalisation was done by Vertis.