Table 2.
Pairwise linkage disequilibrium measurements between SNPs (r2 below and D′ above the diagonal) calculated using the control sample
D′ |
|||||||||
---|---|---|---|---|---|---|---|---|---|
SNP ID | rs363371 | rs363324 | rs363333 | rs363399 | rs363387 | rs363343 | rs4752045 | rs363236 | |
r2 | rs363371 | 1 | 0.868 | 0.965 | 1 | 0.52 | 0.005 | 0.011 | |
rs363324 | 0.61 | 0.932 | 0.91 | 0.963 | 0.506 | 0.096 | 0.028 | ||
rs363333 | 0.025 | 0.207 | 1 | 0.989 | 0.709 | 0.236 | 0.036 | ||
rs363399 | 0.878 | 0.535 | 0.035 | 1 | 0.565 | 0.038 | 0.021 | ||
rs363387 | 0.025 | 0.165 | 0.743 | 0.026 | 0.818 | 0.235 | 0.06 | ||
rs363343 | 0.198 | 0.116 | 0.012 | 0.22 | 0.012 | 0.005 | 0.112 | ||
rs4752045 | 0.001 | 0.005 | 0.007 | 0.0001 | 0.005 | 0.003 | 0.316 | ||
rs363236 | 0.002 | 0.001 | 0.001 | 0.002 | 0.001 | 0.012 | 0.024 |
Key: SNPs, single-nucleotide polymorphisms.