Table 3.
The overall nucleotide diversity (π) within putative transcription factor binding site classes; in the total region covered by transcription factor binding sites; and in regions outside binding sites in the upstream region of each of the three genes
| Gene | πZEB1 | πNFE2L1 | πNFYα | πTOTAL | πOUTSIDE |
|---|---|---|---|---|---|
| CD74 | 0 (12) | 0 (12) | NA (0) | 0 (24) | 0.000052 ± 0.000051 (1943) |
| HSP90α | 0.0017 ± 0.033 (102) | 0 (12) | 0.031 ± 0.025 (16) | 0.0051 ± 0.029 (130) | 0.0019 ± 0.0014 (1641) |
| LCP1 | 0.0073 ± 0.047 (48) | 0 (36) | NA (0) | 0.0042 ± 0.041 (84) | 0.0017 ± 0.0013 (2115) |
The total number of base-pairs covered by the motif or class is given within parentheses.