Table 2.

Sensitivity and Target Size

Vendor	Designed bait region size	Percent of 3.5-Mb targeted region	% Reads mapping to baits	% Bait region covered >1×	% Bait region covered >10×
Agilent	1,635,961	46.5%	69.9%	99.7%	98.0%
NimbleGen microarray	2,827,999	80.4%	81.4%	99.9%	99.7%
NimbleGen SeqCap	2,827,999	80.4%	82.7%	99.9%	99.6%

Each vendor generated a bait design with the goal of capturing the majority of the 3.5-Mb targeted region. Agilent's bait design covered only 1.6 Mb, whereas NimbleGen's covered 2.8 Mb. Each platform had high mapping and coverage rates to their bait regions.