Table 2.
Homogeneous groups formed, and F-values from ANOVA of SNPs from DNA pools simulating triploid and tetraploid populations showing the percentage of correctly classified replications by cluster analysis based on the y′ parameter
| SNP marker | Simulating 3n populations |
Simulating 4n populations |
|||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1:0 | 2:1 | 1:2 | 0:1 | F-value from ANOVA | % 3n correctly classified | 1:0 | 3:1 | 1:1 | 1:3 | 0:1 | F-value from ANOVA | % 4n correctly classified | |
| CiC2840-01 | a | b | c | d | 2975·34 | 100 | a | b | c | d | e | 1644·48 | 100 |
| CiC5089-06 | a | b | c | d | 1045·50 | 100 | a | b | c | d | e | 673·68 | 96 |
| CiC5785-01 | a | b | c | d | 5110·86 | 100 | a | b | c | d | e | 6084·71 | 100 |
| DXS-M618 | a | b | c | d | 2938·98 | 100 | a | b | c | d | e | 3013·55 | 100 |
| F3H-M309 | a | b | c | d | 2063·52 | 100 | a | b | c | d | e | 1445·66 | 100 |
| FLS-M400 | a | b | c | d | 10046·43 | 100 | a | b | c | d | e | 10459·43 | 100 |
| TRPA-M593 | a | b | c | d | 11140·59 | 100 | a | b | c | d | e | 6666·05 | 100 |
| Average | 100 | 99·43 | |||||||||||