TABLE 2.
Main scan QTL peaks
| Chr | Peak (cM) | Interval (cM) | LOD | Sex | Age (Weeks) | Diet | High | Cross | Remark |
| 1 | 44 | 18–66 | 1.9 | F (M?) | 18 | Ath | SM | (NZB×SM)NZB | |
| 45 | 29–76 | 2.2 | M+F | 11 | Chow | CASA | B6×CASA | Add | |
| 63 | 16–74 | 3.2 | F | 10 | Chow | RF | NZB×RF | Add | |
| 68 | 54–88 | 4.5 | M (F?) | 8 | Chow | CAST | CAST×129S1 | ||
| 70 | 52–80 | 7.4 | F (M?) | 8 | Chow | A | B×A | ||
| 70 | 46–82 | 2.8 | M+F | 10 | Chow | NOD | B6×NOD | ||
| 70 | 63–88 | 3.9 | M (F?) | 8 | Chow | RIII | 129×RIII | ||
| 72 | 62–76 | 5.8 | M+F | 16 | Ath | PERA | D2×PERA | ||
| 78 | 64–90 | 2.7 | M (F?) | 8 | Chow | DBA | B6×D2 | ||
| 78 | 74–80 | 27.9 | M+F | 16 | Ath | 129 | B6×129S1 | ||
| 80 | 78–80 | 51.2 | M+F | 8 | Chow | 129 | B6×129S1 | ||
| 80 | 76–84 | 15.0 | M+F | 10 | Chow | NZW | B6×NZW | ||
| 80 | 76–82 | 8.8 | F (M?) | 40 | Chow | Het | NOD×129S1 | ||
| 81 | 73–87 | 7.3 | F (M?) | 8 | Chow | Het | (B6×NZB)B6 | ||
| 81 | 73–85 | 8.3 | M+F | 8 | Chow | NZB | NZB×SM | ||
| 81 | 71–91 | 4.5 | M (F?) | 16 | Ath | RIII | 129×RIII | ||
| 82 | 74–88 | 9.8 | F (M?) | 14 | Western | C3H | B6×C3H | ||
| 82 | 66–86 | 6.8 | F (M?) | 18 | Ath | C3H | B6×C3H-Apoe KO | ||
| 84 | 84–90 | 10.6 | F (M?) | 20 | Ath | 129 | B6×129S1 | ||
| 85 | 63–89 | 2.2 | F (M?) | 23 | Ath | Het | (B6×NZB)B6 | ||
| 85 | 75–89 | 4.6 | M+F | 20 | Ath | NZB | NZB×SM | ||
| 85 | 77–91 | 3.0 | M+F | 24 | Ath | NZB | NZB×SM | ||
| 85 | 2–85 | 2.2 | M (F?) | 24 | Chow | NON | (NON×NZO)NON | ||
| 87 | 67–91 | 3.1 | M+F | 14 | Ath | NZB | NZB×SM | ||
| 89 | 75–89 | 5.6 | F (M?) | 23 | Ath | Het | B6×NZB | ||
| 2 | 44 | 28–84 | 2.3 | M+F | 14 | Ath | NZB | NZB×SM | |
| 46 | 37–95 | 1.8 | F (M?) | 40 | Chow | NOD | NOD×129S1 | ||
| 46 | 42–60 | 6.4 | M (F?) | 8 | Chow | CAST | D2×CAST | ||
| 60 | 32–100 | 2.5 | M+F | 10 | Chow | NZW | B6×NZW | ||
| 83 | 65–90 | 2.3 | M (F?) | 8 | Chow | D2 | B6×D2 | ||
| 83 | 78–88 | 4.1 | F (M?) | 18 | Western | Het | B6×C3H-Apoe KO | ||
| 83 | 74–103 | 2.8 | M+F | 11 | Chow | B6 | B6×CASA | ||
| 84 | 2–102 | 2.2 | F (M?) | 68 | Ath | D2 | B6×D2 | ||
| 96 | 8–96 | 2.3 | F (M?) | 14 | Ath | C3H | B6×C3H | ||
| 100 | 22–100 | 2.4 | F | 10 | Chow | RF | NZB×RF | ||
| 3 | 5 | 2–54 | 2.8 | M+F | 8 | Chow | NZB | NZB×SM | |
| 5 | 2–26 | 3.0 | M+F | 24 | Ath | NZB | NZB×SM | Add | |
| 17 | 13–79 | 2.1 | M+F | 16 | Ath | PERA | PERA×I | Sex-specific | |
| 33 | 23–79 | 2.6 | F (M?) | 52 | Chow | B6 | B6×D2 | Add | |
| 34 | 20–44 | 2.2 | M (F?) | 16 | Ath | Het | 129×RIII | ||
| 42 | 2–52 | 3.0 | M+F | 14 | Ath | NZB | NZB×SM | ||
| 55 | 53–59 | 5.4 | M | 8 | Chow | B6 | B6×129 | ||
| 56 | 44–68 | 2.7 | M (F?) | 8 | Chow | B6 | B6×D2 | ||
| 64 | 64–74 | 2.8 | M+F | 11 | Chow | B6 | B6×CASA | ||
| 4 | 17 | 7–29 | 3.9 | M | 10 | Chow | B6 | B6×NOD | Sex-specific |
| 21 | 11–31 | 4.3 | M+F | 16 | Ath | PERA | D2×PERA | Ad | |
| 26 | 12–38 | 3.9 | M+F | 16 | Ath | PERA | PERA×I | Ad | |
| 27 | 11–55 | 3.1 | M (F?) | 10 | Chow | B6 | B6×A | ||
| 27 | 15–31 | 7.4 | M (F?) | 8 | Chow | D2 | D2×CAST | ||
| 29 | 20–40 | 3.5 | M (F?) | 8 | Chow | 129 | CAST×129S1 | ||
| 48 | 16–76 | 2.7 | F | 8 | Chow | B6 | B6×A | ||
| 61 | 49–81 | 2.2 | M (F?) | 8 | Chow | D2 | B6×D2 | ||
| 62 | 54–68 | 3.7 | F (M?) | 68 | Ath | B6 | B6×D2 | ||
| 5 | 6 | 3–11 | 6.3 | M+F | 16 | Ath | PERA | PERA×I | |
| 10 | 3–49 | 4.3 | M+F | 16 | Ath | 129 | B6×129 | ||
| 35 | 11–43 | 4.6 | F (M?) | 23 | Ath | Het | (B6×NZB)B6 | ||
| 41 | 31–47 | 3.4 | M (F?) | 24 | Chow | Het | (NON×NZO)NON | ||
| 45 | 9–61 | 3.3 | M+F | 8 | Chow | B6 | B6×129 | ||
| 47 | 42–49 | 10.3 | M+F | 20 | Ath | NZB | NZB×SM | ||
| 47 | 21–49 | 8.7 | M+F | 24 | Ath | NZB | NZB×SM | ||
| 49 | 23–58 | 2.3 | F (M?) | 23 | Ath | Het | B6×NZB | ||
| 51 | 23–65 | 2.8 | F (M?) | 8 | Chow | Het | B6×NZB | ||
| 52 | 45–67 | 3.5 | F (M?) | 18 | Ath | NZB | (NZB×SM)NZB | ||
| 52 | 49–67 | 4.6 | F (M?) | 8 | Chow | NZB | (NZB×SM)NZB | ||
| 53 | 47–57 | 20 | F | 10 | Chow | NZB | NZB×RF | ||
| 59 | 41–61 | 10.6 | M+F | 14 | Ath | NZB | NZB×SM | ||
| 61 | 59–71 | 9.1 | M+F | 8 | Chow | NZB | NZB×SM | ||
| 65 | 51–80 | 2.2 | F (M?) | 18 | Ath | NZB | (NZB×SM)NZB | ||
| 79 | 55–80 | 2.8 | F (M?) | 8 | Chow | NZB | (NZB×SM)NZB | ||
| 6 | 29 | 16–67 | 2.3 | M+F | 10 | Chow | NOD | B6×NOD | Add |
| 33 | 20–46 | 2.7 | M (F?) | 8 | Chow | D2 | B6×D2 | Add | |
| 46 | 34–78 | 2.1 | M+F | 16 | Ath | PERA | PERA×I | Add | |
| 60 | 40–72 | 2.7 | F (M?) | 14 | Ath | B6 | B6×C3H | Add | |
| 70 | 58–76 | 4.0 | M+F | 8 | Chow | NZB | NZB×SM | ||
| 70 | 38–78 | 2.1 | M+F | 14 | Ath | NZB | NZB×SM | ||
| 72 | 48–78 | 4.4 | M (F?) | 8 | Chow | CAST | D2×CAST | ||
| 74 | 64–78 | 2.9 | F (M?) | 52 | Chow | Het | B6×D2 | ||
| 78 | 2–78 | 2.4 | F (M?) | 20 | Ath | B6 | B6×129S1 | ||
| 7 | 9 | 9–76 | 2.2 | M (F?) | 8 | Chow | Het | B6×A | |
| 74 | 62–80 | 4.0 | M | 10 | Chow | Het | B6×NOD | Sex-specific | |
| 87 | 75–89 | 3.0 | M+F | 24 | Ath | SM | NZB×SM | Add | |
| 88 | 50–88 | 3.9 | M+F | 16 | Ath | PERA | PERA×I | ||
| 8 | 2 | 2–34 | 2.7 | F | 10 | Chow | NZB | NZB×RF | |
| 3 | 2–52 | 3.3 | M+F | 24 | Ath | NZB | NZB×SM | Add | |
| 3 | 2–52 | 3.6 | M+F | 14 | Ath | NZB | NZB×SM | ||
| 36 | 26–44 | 6.1 | M (F?) | 10 | Chow | B6 | B6×A | ||
| 38 | 24–46 | 4.6 | F (M?) | 8 | Chow | B6 | B6×A | ||
| 46 | 34–66 | 2.3 | F (M?) | 20 | Ath | 129 | B6×129S1 | ||
| 50 | 34–66 | 3.8 | M+F | 10 | Chow | B6 | B6×NOD | ||
| 53 | 39–65 | 3.9 | M+F | 8 | Chow | B6 | B6×129S1 | ||
| 56 | 46–68 | 5.0 | M (F?) | 8 | Chow | B6 | B6×D2 | ||
| 73 | 3–76 | 4.3 | M+F | 11 | Chow | B6 | B6×CASA | ||
| 9 | 2 | 2–34 | 3.8 | M | 24 | Ath | NZB | NZB×SM | Sex-specific |
| 14 | 2–26 | 3.1 | M (F?) | 16 | Ath | RIII | 129×RIII | Add | |
| 18 | 18–25 | 8.1 | M+F | 11 | Chow | CASA | B6×CASA | ||
| 21 | 13–27 | 6.2 | M+F | 8 | Chow | 129 | B6×129S1 | ||
| 22 | 6–34 | 3.0 | F (M?) | 20 | Ath | 129 | B6×129 | ||
| 23 | 21–59 | 1.6 | F (M?) | 18 | Ath | Het | NZB×SM | ||
| 25 | 18–25 | 9.0 | M+F | 11 | Chow | CASA | B6×CASA | ||
| 25 | 22–50 | 6.4 | F (M?) | 40 | Chow | Het | NOD×129 | ||
| 25 | 12–32 | 6.6 | M (F?) | 16 | Ath | RIII | 129×RIII | ||
| 33 | 12–50 | 2.6 | M+F | 24 | Ath | NZB | NZB×SM | ||
| 37 | 17–49 | 5.4 | M+F | 16 | Ath | 129 | B6×129 | ||
| 10 | 2 | 2–66 | 2.4 | M+F | 10 | Chow | Het | B6×NZW | |
| 63 | 53–72 | 3.2 | F/M | 8 | Chow | NZB/SM | NZB×SM | Sex-specific | |
| 68 | 39–68 | 2.2 | M (F?) | 10 | Chow | B6 | B6×A | Sex-specific | |
| 72 | 61–72 | 3.9 | F | 14 | Ath | NZB | NZB×SM | ||
| 11 | 18 | 14–66 | 2.7 | M+F | 14 | Ath | Het | NZB×SM | |
| 27 | 17–43 | 2.7 | M (F?) | 10 | Chow | B6 | B6×A | Add | |
| 30 | 18–54 | 3.4 | M+F | 16 | Ath | PERA | PERA×I | Add | |
| 36 | 14–50 | 3.4 | M+F | 16 | Ath | PERA | D2×PERA | Add | |
| 41 | 35–55 | 4.0 | M+F | 6 | Chow | DU6i | D2×DU6i | ||
| 56 | 43–72 | 2.9 | F (M?) | 14 | Ath | C3H | B6×C3H | ||
| 76 | 58–83 | 2.5 | F (M?) | 68 | Ath | D2 | B6×D2 | ||
| 81 | 73–83 | 3.9 | M+F | 16 | Ath | 129 | B6×129 | ||
| 81 | 3–81 | 2.2 | M+F | 10 | Chow | Het | B6×NZW | ||
| 12 | 10 | 6–44 | 3.4 | F | 10 | Chow | NZB | NZB×RF | Sex-specific |
| 20 | 12–28 | 5.9 | F (M?) | 20 | Ath | 129 | B6×129S1 | ||
| 28 | 10–40 | 4.8 | M (F?) | 16 | Ath | RIII | 129×RIII | ||
| 30 | 17–45 | 7.4 | M | 8 | Chow | I | PERA×I | ||
| 38 | 12–54 | 2.1 | M (F?) | 8 | Chow | B6 | B6×D2 | ||
| 54 | 26–68 | 2.2 | M+F | 8 | Chow | NZB | NZB×SM | ||
| 56 | 10–74 | 2.8 | M+F | 20 | Ath | NZB | NZB×SM | ||
| 13 | 10 | 2–28 | 3.0 | M+F | 8 | Chow | 129 | B6×129 | Add |
| 14 | 19 | 15–29 | 3.1 | M (F?) | 8 | Chow | B6 | B6×D2 | Add |
| 38 | 18–56 | 2.6 | M+F | 10 | Chow | Het | B6×NOD | ||
| 15 | 16 | 4–34 | 2.6 | F (M?) | 14 | Ath | B6 | B6×C3H | Add |
| 18 | 8–28 | 3.0 | M (F?) | 8 | Chow | CAST | CAST×129 | ||
| 23 | 15–35 | 3.5 | F (M?) | 8 | Chow | B6 | B6×A | ||
| 38 | 37–54 | 2.6 | M+F | 8 | Chow | NZB | NZB×SM | ||
| 54 | 24–59 | 2.1 | M+F | 16 | Ath | PERA | PERA×I | ||
| 16 | 11 | 7–21 | 2.7 | F (M?) | 52 | Chow | B6 | B6×D2 | |
| 22 | 20–28 | 2.6 | F (M?) | 18 | Ath | Het | (NZB×SM)NZB | ||
| 28 | 2–44 | 3.6 | M+F | 8 | Chow | NZB | NZB×SM | ||
| 40 | 24–50 | 2.4 | M+F | 24 | Ath | NZB | NZB×SM | ||
| 40 | 6–54 | 2.5 | M+F | 14 | Ath | NZB | NZB×SM | ||
| 49 | 32–49 | 1.6 | F (M?) | 18 | Ath | NZB | (NZB×SM)NZB | ||
| 58 | 3–58 | 2.1 | M+F | 16 | Ath | PERA | PERA×I | ||
| 17 | 9 | 5–31 | 2.2 | F (M?) | 20 | Ath | B6 | B6×129S1 | |
| 12 | 8–61 | 2.4 | M+F | 6 | Chow | D2 | D2×DU6i | Sex-specific | |
| 18 | 14–61 | 2.2 | F | 10 | Chow | RF | NZB×RF | Add | |
| 21 | 5–29 | 2.2 | F (M?) | 8 | Chow | Het | B6×A | Add | |
| 22 | 14–40 | 4.4 | M | 14 | Ath | NZB | NZB×SM | ||
| 22 | 22–50 | 1.7 | F (M?) | 18 | Ath | NZB | (NZB×SM)NZB | ||
| 28 | 8–42 | 2.4 | M+F | 8 | Chow | NZB | NZB×SM | ||
| 30 | 14–40 | 2.2 | M+F | 20 | Ath | NZB | NZB×SM | ||
| 30 | 14–40 | 2.8 | M+F | 24 | Ath | NZB | NZB×SM | ||
| 32 | 16–44 | 2.4 | M+F | 14 | Ath | NZB | NZB×SM | ||
| 39 | 31–51 | 2.6 | M+F | 16 | Ath | D2 | D2×PERA | ||
| 53 | 39–55 | 2.3 | M+F | 16 | Ath | I | PERA×I | ||
| 58 | 40–60 | 2.8 | F (M?) | 18 | wester | C3H | B6×C3H-Apoe KO | ||
| 18 | 17 | 13–39 | 2.6 | F (M?) | 18 | Wester | C3H | B6×C3H-Apoe KO | |
| 19 | 13–39 | 3.7 | F (M?) | 8 | Chow | NZB | (NZB×SM)NZB | ||
| 26 | 10–42 | 2.1 | M (F?) | 8 | Chow | CAST | D2×CAST | ||
| 28 | 15–45 | 2.7 | M+F | 8 | Chow | 129 | B6×129 | ||
| 30 | 16–48 | 2.5 | M | 10 | Chow | B6 | B6×A | ||
| 39 | 21–43 | 2.0 | F (M?) | 18 | Ath | NZB | (NZB×SM)NZB | ||
| 39 | 11–58 | 3.0 | M+F | 8 | Chow | NZB | NZB×SM | ||
| 53 | 41–58 | 3.0 | F (M?) | 14 | Ath | C3H | B6×C3H | ||
| 55 | 39–58 | 2.8 | F (M?) | 52 | Chow | D2 | B6×D2 | ||
| 58 | 41–58 | 2.8 | M+F | 14 | Ath | NZB | NZB×SM | ||
| 58 | 7–58 | 4.0 | M+F | 20 | Ath | NZB | NZB×SM | ||
| 19 | 3 | 3–57 | 1.9 | F (M?) | 40 | Chow | Het | NOD×129 | Sex-specific |
| 14 | 6–52 | 2.4 | F (M?) | 8 | Chow | B6 | B6×A | ||
| 34 | 26–56 | 3.2 | F | 20 | Ath | NZB | NZB×SM | ||
| 34 | 24–54 | 2.6 | M+F | 10 | Chow | NZW | B6×NZW | ||
| 36 | 20–56 | 2.9 | M+F | 14 | Ath | NZB | NZB×SM | ||
| 49 | 35–50 | 5.6 | F | 10 | Chow | NZB | NZB×RF | ||
| 56 | 18–56 | 2.2 | M+F | 8 | Chow | NZB | NZB×SM | ||
| 56 | 38–56 | 3.0 | M+F | 20 | Ath | NZB | NZB×SM | ||
| 56 | 28–56 | 3.0 | M+F | 24 | Ath | NZB | NZB×SM |
Ath, atherogenic; KO, knockout.