Table 2. N-terminal domain alignment of the VP55VP39 heterodimer (RNA-bound form, PDB entry 3erc, chain C; Li et al., 2009 ▶) and monomeric VP55 molecules A or B: r.m.s.d. at two selected points in the C-terminal domains.
By subtraction of the tabulated intermolecular values, the r.m.s.d. between VP55 molecules A and B was 4.14.2 for the C-terminal domain. The intramolecular N-terminal to C-terminal domain distances, Met33Asp372, were 43.3 (3erc, chain C), 44.9 (VP55 chain A) and 43.9 (VP55 chain B).