Table 7. pfam GPCR abundance and diversity.
Serpentine receptor class | Pfam domain | Cele | Pred | Bxyl | Ppac | Mhap | Asuu | Bmal | Tspi |
---|---|---|---|---|---|---|---|---|---|
7TM GPCR chemoreceptor Srh | PF10318.2 | 593 | 196 | 221 | 154 | 2 | 9 | 0 | 0 |
7TM GPCR chemoreceptor Srd | PF10317.2 | 446 | 131 | 206 | 146 | 28 | 16 | 0 | 0 |
7TM GPCR chemoreceptor Str | PF10326.2 | 441 | 152 | 238 | 176 | 20 | 13 | 0 | 0 |
7TM GPCR chemoreceptor Sri | PF10327.2 | 367 | 129 | 90 | 61 | 0 | 1 | 0 | 0 |
7TM GPCR chemoreceptor Srj | PF10319.2 | 338 | 63 | 143 | 131 | 2 | 6 | 0 | 0 |
7TM GPCR chemoreceptor Srx | PF10328.2 | 138 | 28 | 23 | 50 | 9 | 20 | 9 | 2 |
7TM GPCR chemoreceptor Srw | PF10324.2 | 170 | 22 | 27 | 15 | 5 | 23 | 7 | 4 |
7TM GPCR chemoreceptor Srsx | PF10320.2 | 82 | 70 | 62 | 41 | 60 | 35 | 2 | 18 |
Srg family chemoreceptor | PF02118.14 | 101 | 82 | 13 | 39 | 8 | 1 | 0 | 0 |
7TM GPCR chemoreceptor Srbc | PF10316.2 | 88 | 9 | 4 | 4 | 0 | 4 | 0 | 0 |
7TM GPCR receptor class ab chemoreceptor | PF10292.2 | 80 | 42 | 51 | 25 | 13 | 5 | 5 | 1 |
Sre G-protein-coupled chemoreceptor | PF03125.11 | 68 | 51 | 30 | 38 | 9 | 5 | 2 | 0 |
7TM GPCR chemoreceptor Srv | PF10323.2 | 60 | 44 | 10 | 36 | 1 | 2 | 0 | 4 |
7TM GPCR chemoreceptor Srz | PF10325.2 | 72 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
7TM GPCR chemoreceptor Srt | PF10321.2 | 63 | 40 | 33 | 35 | 21 | 3 | 0 | 1 |
7TM GPCR chemoreceptor Sra | PF02117.9 | 59 | 4 | 6 | 5 | 2 | 1 | 3 | 0 |
7TM GPCR chemoreceptor Sru | PF10322.2 | 47 | 11 | 0 | 1 | 1 | 1 | 0 | 0 |
7TM GPCR chemoreceptor Srb | PF02175.9 | 30 | 0 | 0 | 4 | 0 | 1 | 0 | 0 |
Serpentine receptor-like protein, class xa | PF03383.8 | 16 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Total serpentine GPCR Domains | 3259 | 1075 | 1157 | 961 | 191 | 146 | 28 | 31 | |
No. of proteins with multiple GPCR domains | 768 | 276 | 296 | 229 | 34 | 24 | 3 | 3 | |
No. of proteins with only one GPCR domain | 746 | 290 | 198 | 307 | 115 | 78 | 20 | 25 | |
Total no. of GPCR domain-containing proteins | 1514 | 566 | 494 | 536 | 149 | 102 | 23 | 28 |
Repertoire of seven transmembrane receptor domain families across various nematode species identified by hmmscan and pfam is shown (Finn et al. 2011). C. elegans exhibits a dramatic expansion of various subfamilies of these proteins. In contrast, the parasitic species do not display a large number of domains for this class of genes.