. Author manuscript; available in PMC: 2013 Dec 1.

Published in final edited form as: Brain Imaging Behav. 2012 Dec;6(4):621–633. doi: 10.1007/s11682-012-9184-1

Table 3.

Association between minor alleles at three selected SNPs and mRNA expression in cerebellum and cortex of brains from people with AD and non-AD pathology^a

SNP	Allele	Probe	Symbol	Cerebellum			Cortex
				n	β	p-value	n	β	p-value
rs1243459	A	ILMN_1705743	FLJ10357	363	−0.020	0.27	381	0.040	0.24
		ILMN_2276811	METT11D1		−0.020	0.95
		ILMN_1670535	NDRG2		−0.001	0.08		0.010	0.43
		ILMN_2361603	NDRG2		−0.030	0.64		0.020	0.03
		ILMN_1762871	RNASE13		−0.006	0.17
		ILMN_1730628	RNASE2		0.030	0.07		−0.140	0.02
		ILMN_1688295	ZNF219		−0.080	0.63		0.010	0.40
rs3748348	A	ILMN_1705743	FLJ10357	365	0.040	0.07	382	0.002	0.96
		ILMN_2276811	METT11D1		0.020	0.11
		ILMN_1670535	NDRG2		0.030	0.08		−0.020	0.22
		ILMN_2361603	NDRG2		0.006	0.64		−0.020	0.03
		ILMN_1762871	RNASE13		−0.030	0.19
		ILMN_1730628	RNASE2		0.030	0.45		0.130	0.05
		ILMN_1688295	ZNF219		0.010	0.50		−0.006	0.74
rs9624	T	ILMN_1705743	FLJ10357	365	0.010	0.53	382	0.150	0.002
		ILMN_2276811	METT11D1		0.010	0.39
		ILMN_2361603	NDRG2		0.030	0.04		0.010	0.27
		ILMN_1670535	NDRG2		0.000	0.98		−0.030	0.26
		ILMN_1762871	RNASE13		0.050	0.12
		ILMN_1730628	RNASE2		−0.050	0.44		−0.060	0.48
		ILMN_1688295	ZNF219		0.010	0.45		0.010	0.51

β coefficient refers to the adjusted strength of association between the number of copies of the minor allele and the level of expression for each probe. The adjustment model is specified in the Methods section