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. 2013 Mar 25;8(3):e58306. doi: 10.1371/journal.pone.0058306

Table 3. Top 20 canonical pathways within the first 24 h of immune response after the first vaccination.

Ingenuity Canonical Pathway Pathway Category −log p at 2 h −log p at 4 h −log p at 8 h −log p at 24 h
Fcγ Receptor-mediated Phagocytosis inMacrophages and Monocytes 1 6.79 2.25 2.37 6
CD28 Signaling in T Helper Cells 1 4.92 n.s. 1.68 5.63
CTLA4 Signaling in Cytotoxic T Lymphocytes 1 3.64 n.s. n.s. 6.06
T Cell Receptor Signaling 1 2.2 n.s. 3.22 5.79
Regulation of IL-2 Expression in Activated andAnergic T Lymphocytes 1; 2 1.48 n.s. 4.13 2.31
Clathrin-mediated Endocytosis Signaling 1; 3; 9 4.15 2.66 n.s. 4.63
ILK Signaling 4 4.69 2.03 n.s. 1.59
FAK Signaling 4 3.83 1.58 1.68 4
VEGF Signaling 4; 10 3.11 2.98 2.6 4.74
IGF-1 Signaling 4; 10 1.61 3.5 2.63 3.54
Integrin Signaling 4; 5; 7 6.2 2.74 2.94 4.08
Protein Ubiquitination Pathway 5 1.45 3.7 5.69 n.s.
ERK/MAPK Signaling 5 3.01 2.05 4.26 5.09
Glucocorticoid Receptor Signaling 5 2.59 2.95 4.76 3.65
Estrogen Receptor Signaling 6 n.s. 3.82 4.02 n.s.
Aldosterone Signaling in Epithelial Cells 6; 12 2.6 2.47 3.06 2.12
NRF2-mediated Oxidative Stress Response 8; 13 2.11 2.14 5.93 1.66
Actin Cytoskeleton Signaling 9 5.15 3.11 4.62 4.81
Regulation of Actin-based Motility by Rho 11 3.94 3.68 1.36 1.62
Ephrin Receptor Signaling 9 2.71 n.s. n.s. 5.45

1 Cellular Immune Response.

2 Cytokine Signaling.

3 Pathogen-Influenced Signaling.

4 Cellular Growth, Proliferation and Development.

5 Intracellular and Second Messenger Signaling.

6 Nuclear Receptor Signaling.

7 Cell Cycle Regulation.

8 Cellular Stress and Injury.

9 Organismal Growth and Development.

10 Growth Factor Signaling.

11 Neurotransmitters and Other Nervous System Signaling.

12 Cardiovascular Signaling.

13 Ingenuity Toxicity List Pathways.

n.s. not significant.