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. 2013 Apr;141(4):445–465. doi: 10.1085/jgp.201210856

Figure 1.

Figure 1.

A subset of a larger multiple sequence alignment of the four TM regions of VSDs informed by alignment of the open state produced by structural superposition of crystal structures of the paddle chimera (green ribbon) and NaVAB (white ribbon). The arginines of S4 (blue sticks) are labeled according to their position on the paddle chimera. Note that the most extracellular R of NaVAB corresponds to R2 of the paddle chimera, and the most intracellular R of NaVAB corresponds to K5 of the paddle chimera. The completely conserved phenylalanine on S2 is shown and labeled as “CTC.” The following residues are indicated with symbols over the alignment: %, CTC; *, R1 of Shaker; #, R2 of Shaker; ^, R3 of Shaker.