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. 2013 Mar 26;8(3):e60576. doi: 10.1371/journal.pone.0060576

Table 3. Clinicopathological features and protein expression by HER2 and MYC amplification status.

Factor (N) HER2 amplification [N(%)] OR (95% CI) MYC amplification [N(%)] OR (95% CI) MYC duplication or pol8 [N(%)] OR (95% CI) High MYC gain [N(%)] OR (95% CI) MYC gain [N(%)] OR (95% CI)
Negative (HER2/CEP17≤2.2) Positive (HER2/CEP17>2.2)* Negative (MYC/CEP8≤2.2) Positive (MYC/CEP8>2.2)* Negative (MYC/CEP8<1.3) Positive (MYC/CEP8≥1.3 or pol8) Negative (MYC/nucleus<5) Positive (MYC/nucleus≥5)* Negative (MYC/nucleus<2.5) Positive (MYC/nucleus≥2.5)*
Age
≤40 (27) 17 (14.66) 10 (8.62) 0.431 (0.169–1.100) 25 (21.55) 2 (1.72) 0.480 (0.366–8.495) 5 (4.31) 22 (18.97) 0.169 (0.059–0.488)** 24 (20.69) 3 (2.59)) 1.622 (0.432–6.085) 1 (0.86) 26 (22.41 0.093 (0.012–0.723)**
>40 (89)* 71 (61.21) 18 (15.52) 78 (67.24) 11 (9.48) 51 (43.97) 38 (32.76) 74 (63.79) 15 (12.93) 26 (22.41) 63 (54.31)
Grade
1/2 (96) 75 (64.66) 21 (18.10) 1.923 (0.681–5.432) 86 (74.14) 10 (8.62) 1.518 (0.378–6.100) 48 (41.38) 48 (41.38) 1.500 (0.563–3.997) 82 (70.69) 14 (12.07) 1.464 (0.426–5.028) 23 (19.83) 73 (62.93) 1.260 (0.383–4.150)
3 (20)* 13 (11.21) 7 (6.03) 17 (14.66) 3 (2.59) 8 (6.90) 12 (10.34) 16 (13.79) 4 (3.45) 4 (3.45) 16 (13.79)
Tumor invasion
T1/T2 (9) 7 (6.03) 2 (1.72) 1.123 (0.220–5.748) 7 (6.03) 2 (1.72) 0.401 (0.074–2.175) 5 (4.31) 4 (3.45) 1.373 (0.349–5.393) 7 (6.03) 2 (1.72) 0.615 (0.117–3.233) 1 (0.86) 8 (6.90) 0.389 (0.046–3.262)
T3/T4 (107)* 81 (69.83) 26 (22.41) 96 (82.76) 11 (9.48) 51 (43.97) 56 (48.28) 91 (78.45) 16 (13.79) 26 (22.41) 81 (69.83)
Lymph node metastasis
Absent (6) 4 (3.45) 2 (1.72) 0.619 (0.107–3.575) 5 (4.31) 1 (0.86) 0.612 (0.066–5.689) 4 (3.45) 2 (1.72) 2.231 (0.392–12.686) 5 (4.31) 1 (0.86) 0.914 (0.100–8.318) 2 (1.72) 4 (3.45) 1.700 (0.294–8.832)
Present (110)* 84 (72.41) 26 (22.41) 98 (84.48) 12 (10.34) 52 (44.83) 58 (50.00) 93 (80.17) 17 (14.66) 25 (21.55) 85 (73.28)
Response to therapy
Sensitive (50) 46 (39.66) 4 (3.45) 6.571 (2.106–20.509)** 49 (42.24) 1 (0.86) 10.889 (1.365–86.840)** 30 (25.86) 20 (17.24) 2.308 (1.089–4.890)** 48 (41.38) 2 (1.72) 7.680 (1.676–35.199)** 12 (10.34) 38 (32.76) 1.074 (0.451–2.557)
Resistant (66)* 42 (36.21) 24 (20.69) 54 (46.55) 12 (10.34) 26 (22.41) 40 (34.48) 50 (43.10) 16 (13.79) 15 (12.93) 51 (43.97)
HR expression
Negative (62) 39 (33.62) 23 (19.83) 0.173 (0.060–0.497)** 50 (43.10) 12 (10.34) 0.079 (0.010–0.627)** 21 (18.10) 41 (35.34) 0.278 (0.129–0.599)** 46 (39.66) 16 (13.79) 0.111 (0.024–0.507)** 8 (6.90) 54 (46.55) 0.273 (0.108–0.691)**
Positive (54)* 49 (42.24) 5 (4.31) 53 (45.69) 1 (0.86) 35 (30.17) 19 (16.38) 52 (44.83) 2 (1.72) 19 (16.38) 35 (30.17)
HER2 expression
Negative (67) 62 (53.45) 5 (4.31) 10.969 (3.761–31.981)** 65 (56.03) 2 (1.72) 9.408 (1.979–44.721)** 41 (35.34) 26 (22.41) 3.574 (1.636–7.808)** 65 (56.03) 2 (1.72) 15.758 (3.417–72.663)** 20 (17.24) 47 (40.52) 2.553 (0.981–6.642)**
Positive (49)* 26 (22.41) 23 (19.83) 38 (32.76) 11 (9.48) 15 (12.93) 34 (29.31) 33 (28.45) 16 (13.79) 7 (6.03) 42 (36.21)
MYC expression
Negative (80) 77 (66.38) 3 (2.59) 58.333 (15.062–225.913)** 79 (68.10) 1 (0.86) 39.500 (4.883–319.520)** 53 (45.69) 27 (23.27) 21.593 (6.067–76.850)** 78 (67.24) 2 (1.72) 31.200 (6.623–146.981)** 26 (22.41) 54 (46.55) 16.852 (2.187–129.871)**
Positive (36)* 11 (9.48) 25 (21.55) 24 (20.70) 12 (10.34) 3 (2.59) 33 (28.45) 20 (17.24) 16 (13.79) 1 (0.86) 35 (30.17)
HER2 amplification
Negative (88) 87 (75.00) 1 (0.86) 65.250 (7.923–537.398)** 54 (46.55) 34 (29.31) 20.647 (4.603–92.614)** 87 (75.00) 1 (0.86) 134.455 (16.267–1111.302)** 26 (22.41) 62 (53.45) 11.323 (1.461–87.758)**
Positive (28)* 16 (13.79) 12 (10.34) 2 (1.72) 26 (22.41) 11 (9.48) 17 (14.66) 1 (0.86) 27 (23.28)
*

Reference group for logistic regression analysis; ** Differentially expressed between groups, p<0.05. N: number of samples; OR: odds ratio; CI: confidence interval. HR: hormone receptor; CEP17: chromosome 17 signals ; CEP8: chromosome 8 signals; pol8: chromosome 8 polysomy.