Skip to main content
. 2013 Mar 26;8(3):e60195. doi: 10.1371/journal.pone.0060195

Table 1. PCR primers and probes of candidate SNPs of miRNAs.

SNP PCR primers Extend primer
Has-miR-10b rs1867863 forward primer:ACGTTGGATGTCAGAAAGTGCGGGTGGCTG CTTCCTCTGAGCCAC
reverse primer:ACGTTGGATGTGAGGTACCTAGGTCGCTG
hsa-mir-27a rs895819 forward primer:ACGTTGGATGAGCAGGGCTTAGCTGCTTGT TGTGAACACGACTTGG
reverse primer:ACGTTGGATGACTTAGCCACTGTGAACACG
hsa-mir-423 rs6505162 forward primer:ACGTTGGATGTTTTCCAAAAGCTCGGTCTG gggatAAACTCAAGCGCGGG
reverse primer:ACGTTGGATGCAAGCGGGGAGAAACTCAAG
hsa-mir-492 rs2289030 forward primer:ACGTTGGATGAGCACCCAAACACTCAAACC ACTTGGTTCAGAAGTCAT
reverse primer:ACGTTGGATGGGATTGTCCTGCAGATCAAC
hsa-mir-603 rs11014002 forward primer:ACGTTGGATGATTGCAGTGTGTGCCATTAC cTGGTGCAAAAGTAATTGCAGTG
reverse primer:ACGTTGGATGGGCAAGATTGATGCTGTTGG
hsa-mir-604 rs2368392 forward primer:ACGTTGGATGAAAACCTGCCTGCTAGTGGA GTGCTTGACCTTCCA
reverse primer:ACGTTGGATGCATGCACTGAGAGAGGTGTC
hsa-mir-605 rs2043556 forward primer:ACGTTGGATGTGTGGCTGTCAGCCTGTAAC aagatAAGGCACTATGAGATTTAGAA
reverse primer:ACGTTGGATGAACAGAGAAGGCACTATGAG
hsa-mir-608 rs4919510 forward primer:ACGTTGGATGAAGATCCACTGGGCCAAGGT GGAGATGCCTTTTTAAACG
reverse primer:ACGTTGGATGATGGAAGCTCTTGGAGATGC
hsa-mir-100 rs1834306 forward primer:ACGTTGGATGGAAAAAGTGGAAACCAAGGG tttgTCTTCTATGTTCTCCCCA
reverse primer:ACGTTGGATGGTCCCACTCTCACAAAAGC
hsa-mir-105-1 rs5970293 forward primer:ACGTTGGATGCTGAGCAGTTTTTACTCTGTG GGATAGATATGGTATCCCAG
reverse primer:ACGTTGGATGGGAGAATAGGTCAATTCATAC
hsa-mir-105-2 rs5970292 forward primer:ACGTTGGATGAGAAGGAGGCAAACACACTG TCTGTACCATGAATATAATTTTGTG
reverse primer:ACGTTGGATGAAAATGGAATTTTCTGTACC
hsa-mir-1206 rs2114358 forward primer:ACGTTGGATGCATGTAGATGTTTAAGCTC tccGCGTTCACTAGCTTGCAAAAA
reverse primer:ACGTTGGATGGTGTGGCGAGCATAATTTGG
hsa-mir-1274a rs318039 forward primer:ACGTTGGATGAGTAACTGTCGTAGTGATGG ccCCCTGTTCAGGCGCCAC
reverse primer:ACGTTGGATGTCCCTGTTTGTCCCTGTTC
hsa-mir-125b-1 rs2081443 forward primer:ACGTTGGATGCACACATACGCAGTATCTGG ctagCGTATGTGTATGTGCGTGATTGT
reverse primer:ACGTTGGATGCTCGTGATCGTATGTGTATG
hsa-mir-146a rs2910164 forward primer:ACGTTGGATGCCACGATGACAGAGATATCC ttggTGTGTCAGTGTCAGACCT
reverse primer:ACGTTGGATGGAACTGAATTCCATGGGTTG
hsa-mir-373 rs12983273 forward primer:ACGTTGGATGTAAACTTGCTTGCTATGGG gGTTGGTGTTATAATTGATATGTAA
reverse primer:ACGTTGGATGGGAATGCTTTTTGCTGTTGG
hsa-mir-26a-1 rs7372209 forward primer:ACGTTGGATGCAGTCATGCTTACAGTCACG AATTAGGAGAGAAATTAATCCTT
reverse primer:ACGTTGGATGAAAGGAGAGGCTGCCCAATG
hsa-mir-124a-1 rs531564 forward primer:ACGTTGGATGACAGACAGGGGCTTAGAGA ggggtTTTCTCTCCCTGAGTCT
reverse primer:ACGTTGGATGTGCACAGATCTGCTTCTGTC
hsa-let-7f-2 rs17276588 forward primer:ACGTTGGATGGTACACTGCAAAAAGAAGGG TAGGTGCTTGCAAAGT
reverse primer:ACGTTGGATGGGTGACTATTACAGTTGACC
hsa-mir-149 rs2292832 forward primer:ACGTTGGATGTCTTCACTCCCGTGCTTGTC GACCTGCGTTGTTCC
reverse primer:ACGTTGGATGAACTCGCCCAGCCGGCCC
hsa-mir-196a2 rs11614913 forward primer:ACGTTGGATGTCGACGAAAACCGACTGATG aaTCGGCAACAAGAAACTG
reverse primer:ACGTTGGATGCTGATCTGTGGCTTAGGTAG
hsa-mir-30c-1 rs16827546 forward primer:ACGTTGGATGCCTGACCACTGACACAGAAC ggagGTGTCACACAGGTCA
reverse primer:ACGTTGGATGGTTTTTGTTGTCCCAGGCAG
hsa-mir-373 rs10425222 forward primer:ACGTTGGATGAAGCTTTTCCTGCCCTGTTC gggtCAGGATACGGGGTTCA
reverse primer:ACGTTGGATGCACCAGTCTGTATGCTCCAT
hsa-mir-943 rs1077020 forward primer:ACGTTGGATGTAGCCTAGAAGAGGGTGGGA CCCCACCCCCTGAGC
reverse primer:ACGTTGGATGTGGAGGACGGCAACAGTCAG