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. 2013 Mar 26;8(3):e58419. doi: 10.1371/journal.pone.0058419

Table 1. Up-Ex Receptivity Associated Genes (RAGs) and their Reliability Scores.

S.No. Gene Symbol Gene Name Upregulation Score Expression Score Cumulative Score
1 SPP1 secreted phosphoprotein 1 18 12 30
2 GPX3 glutathione peroxidase 3 (plasma) 14 12 26
3 PAEP progestagen-associated endometrial protein 12 12 24
4 IGFBP7 insulin-like growth factor binding protein 7 12 12 24
5 IL15 interleukin 15 12 12 24
6 CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 10 12 22
7 CLDN4 claudin 4 6 16 22
8 DPP4 dipeptidyl-peptidase 4 8 12 20
9 COMP cartilage oligomeric matrix protein 6 12 18
10 LAMB3 laminin, beta 3 6 12 18
11 TIMP1 TIMP metallopeptidase inhibitor 1 4 14 18
12 DCN decorin 4 14 18
13 LIF leukemia inhibitory factor (cholinergic differentiation factor) 2 16 18
14 TCN1 transcobalamin I (vitamin B12 binding protein, R binder family) 4 12 16
15 C4BPA complement component 4 binding protein, alpha 4 12 16
16 IL6ST interleukin 6 signal transducer (gp130, oncostatin M receptor) 4 12 16
17 MAOA monoamine oxidase A 4 12 16
18 MFAP5 microfibrillar associated protein 5 4 12 16
19 TSPAN8 tetraspanin 8 4 12 16
20 FAM148B family with sequence similarity 148, member B 4 12 16
21 GADD45A growth arrest and DNA-damage-inducible, alpha 4 12 16
22 S100P S100 calcium binding protein P 4 12 16
23 IGFBP3 insulin-like growth factor binding protein 3 4 12 16
24 FXYD2 FXYD domain containing ion transport regulator 2 4 12 16
25 ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 4 12 16
26 TIMP2 TIMP metallopeptidase inhibitor 2 4 12 16
27 ANGPTL1 angiopoietin-like 1 4 12 16
28 WFDC2 WAP four-disulfide core domain 2 2 14 16
29 AIMP1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 2 12 14
30 TMOD1 tropomodulin 1 2 12 14
31 IL1R1 interleukin 1 receptor, type I 2 12 14
32 SNX10 sorting nexin 10 2 12 14
33 UBE2L6 ubiquitin-conjugating enzyme E2L 6 2 12 14
34 CXCR4 chemokine (C-X-C motif) receptor 4 2 12 14
35 CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 2 12 14
36 HLA-A major histocompatibility complex, class I, A 2 12 14
37 GJA1 gap junction protein, alpha 1, 43kDa 2 12 14
38 ANG angiogenin, ribonuclease, RNase A family, 5 2 12 14
39 CD36 CD36 molecule (thrombospondin receptor) 2 12 14
40 SLC1A1 solute carrier family 1 2 12 14
41 DHRS3 dehydrogenase/reductase (SDR family) member 3 2 12 14
42 SFN Stratifin 2 12 14
43 NID1 nidogen 1 2 12 14
44 TGM2 transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) 2 12 14
45 ANXA4 annexin A4 2 12 14
46 C1orf106 chromosome 1 open reading frame 106 2 12 14
47 PTN pleiotrophin 2 12 14
48 BCL2A1 BCL2-related protein A1 2 12 14
49 ANXA2 annexin A2 pseudogene 3; annexin A2; annexin A2 pseudogene 1 2 12 14
50 RARRES1 retinoic acid receptor responder (tazarotene induced) 3 2 12 14
51 G0S2 G0/G1switch 2 2 12 14
52 THBD thrombomodulin 2 12 14
53 FBLN1 fibulin 1 2 12 14
54 CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9 2 12 14
55 CTTN cortactin 2 12 14
56 PAPSS2 3′-phosphoadenosine 5′-phosphosulfate synthase 2 2 12 14
57 B2M beta-2-microglobulin 2 12 14
58 ADRA2A adrenergic, alpha-2A-, receptor 2 12 14
59 MAP3K5 mitogen-activated protein kinase kinase kinase 5 2 12 14
60 C9orf71 chromosome 9 open reading frame 71 2 12 14
61 DKK1 dickkopf homolog 1 (Xenopus laevis) 2 12 14
62 ST6GAL1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 2 12 14
63 GRAMD1C GRAM domain containing 1C 2 12 14