Table 2. Selected1 transporters associated with carbohydrate import identified within sequenced Thermoanaerobacter spp.
Clade 1 | Clade 2 | Clade 3 | |||||||||
T. brockii subsp. finnii Ako-1 | T. ethanolicus CCSD1 | T. pseudethanolicus 39E | Thermoanaerobacter sp. X513 | Thermoanaerobacter sp. X514 | Thermoanaerobacter sp. X561 | T. italicus Ab9 | T. mathranii subsp. mathranii A3 | T. siderophilus SR4 | T. thermohydrosulfuricus WC1 | T. wiegelii Rt8.B1 | |
Cationic Symporters | |||||||||||
2-Keto-3-Deoxygluconate | + | + | + | − | − | − | − | − | − | − | − |
Glycoside/Pentoside/Hexuronide Cation Symporter | + | + | + | + | + | + | + | + | + | + | + |
ATP Binding Family | |||||||||||
Lactose/L-arabinose | − | − | − | − | − | − | + | + | + | + | + |
Maltose/Maltodextrin | + | + | + | + | + | + | + | + | + | + | + |
Methyl-Galactoside | − | + | − | − | − | − | − | − | − | − | − |
Multiple Sugar (unspecified) | + | + | + | + | + | + | + | + | + | + | + |
Oligogalacturonide | − | − | − | − | − | − | + | − | + | − | − |
Putative Multiple Sugar (unspecified) | − | − | − | + | + | + | − | − | + | + | + |
Putative Sugar (unspecified) | − | − | − | − | − | − | + | − | − | − | − |
Ribose | + | + | + | + | + | + | + | + | − | + | + |
Simple Sugar (unspecified) | + | + | + | + | + | + | + | + | + | + | + |
Xylose | − | + | − | + | + | + | + | + | + | + | + |
PTS Family | |||||||||||
Cellobiose | + | + | + | + | + | + | + | + | + | + | + |
Fructose | + | + | + | + | + | + | + | − | + | + | + |
Galactitol | + | + | + | + | + | + | + | + | + | + | + |
Galactosamine | − | − | − | − | − | − | − | − | + | + | + |
Glucitol/Sorbitol | − | − | − | − | − | − | − | − | + | + | + |
Mannitol | + | + | + | + | + | + | + | + | + | + | + |
Mannose | + | + | + | + | + | + | + | + | + | + | + |
N-Acetylglucosamine | + | + | + | + | + | + | + | + | + | + | + |
Sucrose | − | − | − | + | + | + | − | − | + | + | − |
Symbols denote the presence (+) or absence (−) of a particular annotated transporter within each genome. Substrate specificity is inferred based upon KO annotated specificity of the substrate binding protein (ABC transporters) or the membrane linked EIIC components (PTS transporters).
Transport systems presented are limited to complexes showing co-localization of all genes needed to form a functional complex. Complexes lacking annotation of a single component are not included. Redundancy in transport systems exists, but is not identified.