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. 2013 Mar 26;8(3):e59362. doi: 10.1371/journal.pone.0059362

Table 3. Identification of the genomic potential for sequenced Thermoanaerobacter strains to utilize the major carbohydrate hydrolysis products of lignocellulose degradation.

Clade 1 Clade 2 Clade 3
T. brockii subsp. finnii Ako-1 T. ethanolicus CCSD1 T. pseudethanolicus 39E Thermoanaerobacter sp. X513 Thermoanaerobacter sp. X514 Thermoanaerobacter sp. X561 T. italicus Ab9 T. mathranii subsp. mathranii A3 T. siderophilus SR4 T. thermohydrosulfuricus WC1 T. wiegelii Rt8.B1
Cellulose Hydrolysis Products1 Glucose Genes Present + + + + + + + + + + +
Reported Phenotype + NR + + + + + + + + +
Cellobiose Genes Present + + + + + + + + + + +
Reported Phenotype + NR + NR NR NR + + + + +
Hemicellulose Hydrolysis Products Arabinose Genes Present + +
Reported Phenotype NR NR NR NR + +
Galactose Genes Present + + + + + + + + + + +
Reported Phenotype + NR + NR NR NR + NR + +
Mannose Genes Present + + + + + + + + + + +
Reported Phenotype + NR + NR NR NR + + NR + +
Xylose Genes Present + + + + + + + + + + +
Reported Phenotype + NR + + + + + + + + +
Glucuronic Acid Genes Present + + +
Reported Phenotype NR NR NR NR NR NR NR NR NR NR NR
Reference [83] 2 [14] [85] [85] [85] [12] [13] [54] [15] [84]

Symbols denote the presence (+) or absence (–) of all enzymes needed for hydrolysis to pyruvate or whether the substrate has been reported to be used (+) or not used (−) in the literature. NR denotes substrate utilization has not yet been reported for a particular strain.

1

Cellulose hydrolysis products have been limited to glucose and cellobiose and not higher order cellodextrins.

2

Physiological data has not yet been reported for this strain.