Table 3. Identification of the genomic potential for sequenced Thermoanaerobacter strains to utilize the major carbohydrate hydrolysis products of lignocellulose degradation.
Clade 1 | Clade 2 | Clade 3 | |||||||||||
T. brockii subsp. finnii Ako-1 | T. ethanolicus CCSD1 | T. pseudethanolicus 39E | Thermoanaerobacter sp. X513 | Thermoanaerobacter sp. X514 | Thermoanaerobacter sp. X561 | T. italicus Ab9 | T. mathranii subsp. mathranii A3 | T. siderophilus SR4 | T. thermohydrosulfuricus WC1 | T. wiegelii Rt8.B1 | |||
Cellulose Hydrolysis Products1 | Glucose | Genes Present | + | + | + | + | + | + | + | + | + | + | + |
Reported Phenotype | + | NR | + | + | + | + | + | + | + | + | + | ||
Cellobiose | Genes Present | + | + | + | + | + | + | + | + | + | + | + | |
Reported Phenotype | + | NR | + | NR | NR | NR | + | + | + | + | + | ||
Hemicellulose Hydrolysis Products | Arabinose | Genes Present | − | − | − | − | − | − | + | + | − | − | − |
Reported Phenotype | − | NR | – | NR | NR | NR | + | + | − | − | − | ||
Galactose | Genes Present | + | + | + | + | + | + | + | + | + | + | + | |
Reported Phenotype | + | NR | + | NR | NR | NR | + | − | NR | + | + | ||
Mannose | Genes Present | + | + | + | + | + | + | + | + | + | + | + | |
Reported Phenotype | + | NR | + | NR | NR | NR | + | + | NR | + | + | ||
Xylose | Genes Present | + | + | + | + | + | + | + | + | + | + | + | |
Reported Phenotype | + | NR | + | + | + | + | + | + | + | + | + | ||
Glucuronic Acid | Genes Present | − | − | − | − | − | − | + | + | − | + | − | |
Reported Phenotype | NR | NR | NR | NR | NR | NR | NR | NR | NR | NR | NR | ||
Reference | [83] | −2 | [14] | [85] | [85] | [85] | [12] | [13] | [54] | [15] | [84] |
Symbols denote the presence (+) or absence (–) of all enzymes needed for hydrolysis to pyruvate or whether the substrate has been reported to be used (+) or not used (−) in the literature. NR denotes substrate utilization has not yet been reported for a particular strain.
Cellulose hydrolysis products have been limited to glucose and cellobiose and not higher order cellodextrins.
Physiological data has not yet been reported for this strain.