Table 2.

SSR primers, and the parental allele score sizes used to score the MGDH population

SSR		Primers		Allele size (bp)		References
Marker	Fluorophore	Forward	Reverse	MarDH34	GDDH33
BN83B1	FAM	GCCTTTCTTCACAACTGATAGCTAA	TCAGGTGCCTCGTTGAGTTC	0	185	Szewc-McFadden et al. (1996) and Sebastian et al. (2000)
BRAS026	NED	ATTACAAAAATGCCCTGAC	TAAGTGATCTTCTCTCCAACA	0	122	Piquemal et al. (2005)
BRAS069	FAM	CTCGATCTTCCCCTGCTTTC	GTTGAGCCAATCTACGGTTCC	196	199	Piquemal et al. (2005)
BRMS042	HEX	GGATCAGTTATCTGCACCACAA	TCGGAATTGGATAAGAATTCAA	0	106	Suwabe et al. (2002)
BRMS063	NED	–	–	238	237	Masashi Hirai, Kyoto Prefectural University, Kyoto, Japan. Personal communication
BRMS071	FAM	CAAAGCGAGAAAGTGCAGTTGAGAG	TCCACGAAACTACTGCAGATTGAAA	289	239	Suwabe et al. (2002)
BRMS296	NED	CATCCTAATGTTGCTGAGAAAGAGG	TATATGAAACCGATGAAGCTCCTTT	146	141	Suwabe et al. (2002)
FITO203	FAM	AAGTCGTTAGGCGAATCTG	ATTGAAGAGGAAGAAGGAGAA	276	313	Iniguez-Luy et al. (2008)
FITO222	NED	GCACACTCCACTACACGAA	ACCATTCAACCACTCAAATC	385	414	Iniguez-Luy et al. (2008)
FIT0284	PET	AGCAATAAGCCAGAAACTTG	GTTCATCATCACAACTCTAACCT	304	359	Iniguez-Luy et al. (2008)
FITO285	VIC	TGAAGATGGGACTCAAACA	GATGAAGCAGAGAATGACAAG	185	192	Iniguez-Luy et al. (2008)
MB4	HEX	TGTTTTGATGTTTCCTACTG	GAACCTGTGGCTTTTATTAC	0	66	Sebastian et al. (2000
Na10D09	FAM	AAGAACGTCAAGATCCTCTGC	ACCACCACGGTAGTAGAGCG	156	147	Lowe et al. (2002,2003)
Na12C03	NED	ATCGTTGCCATTAGGAGTGG	ACCAAATTAACCCTCTTTGC	208	272	Lowe et al. (2003)
Na12C08	FAM	GCAAACGATTTGTTTACCCG	CGTGTAGGGTGATCTAGATGGG	315	271	Lowe et al. (2003)
Na12F03	NED	GGCGACATAGATTTGAACCG	TCCACTTTCTCTCTCTTCCCC	325	312	Lowe et al. (2003)
Na12G12	NED	GAGTGACATCGAAAATCAGATAGC	CCTAAATGGAAAGGCTTGGC	156	131	Lowe et al. (2003)
Ni2C12	NED	ACATTCTTGGATCTTGATTCG	AAAGGTCAAGTCCTTCCTTCG	127	170	Lowe et al. (2002, 2003)
OL10B01	FAM	CCTCTTCAGTCGAGGTCTGG	AATTTGGAAACAGAGTCGCC	181	165	Lowe et al. (2003)
OL10D08	HEX	TCCGAACACTCTAAGTTAGCTCC	GAGCTGTATGTCTCCCGTGC	172	186	Lowe et al. (2003)
OL11B05	FAM	TCGCGACGTTGTTTTGTTC	ACCATCTTCCTCGACCCTG	139	135	Lowe et al. (2003)
OL11H06	VIC	TCCGAACACTCTAAGTTAGCTCC	TTCTTCACTTCACAGGCACG	190	196	Lowe et al. (2003)
OL12A04	NED	TGGGTAAGTAACTGTGGTGGC	AGAGTTCGCATACTCTGGAGC	192	206	Lowe et al. (2003)
OL12G04	HEX	CGAACATCTTAGGCCGAATC	GGTTAACCTGCGGGATATTG	132	142	Lowe et al. (2003)
Ra2E12	HEX	TGTCAGTGTGTCCACTTCGC	AAGAGAAACCCAATAAAGTAGAACC	143	148	Lowe et al. (2003)
Ra2G09	NED	ACAGCAAGGATGTGTTGACG	GATGAGCCTCTGGTTCAAGC	254	0	Lowe et al. (2003)
Sn3734	FAM	CCCCTTCCGGTTAAACAAAT	AAAACAGACTTTGCCCGTTG	288	286	Agriculture and Agri-Food Canada Consortium
SSR28	VIC	–	–	239	226	Yong Pyo Lim, National University, Daejeon, Korea, personal communication