Table 3.
Primers and oligonucleotides used in this study.
| RFP-F | GCTCATGATGGCCTCCTCCGAGGAC |
|---|---|
| RFP-R | GCTCATGAGGAACAGGTGGTGGCGG |
| fimX-N1 | CTAGGATCCGATATCCGCCAGGTACGCAATGGC |
| fimX-N2 | GATGAATTCCAGAATCAGCAGGCGG |
| fimX-C1 | GATGAATTCTCCTCGGGAGACGAATG |
| fimX-C2 | CGTGAAGCTTGATATCGCTTTCCAGCAGGACAG |
| BB2-A | CGCTGGATCCGCCAGGTACGCAATGG |
| BB2-B | TGGTGTGCACCTCCATGGAAAGGGCTCAGTCCGCG |
| BB2-C | GGAGGTGCACACCAACCAGGACCCGCTCGACGCCATCGAAAAGAAAACCATCCGC |
| BB2-D | CCGGGCTCGAGACACTCGCTGG |
| REC-3 | GCTCACTCGAGTTGCTGCTCGAAGCTCGGTCGACGCCATCAC |
| REC-2 | CGCCGTCGTACGTGGCGG |
| GGDEF-1 | CTCAGCTCGAGCCCGGCGAG |
| GGDEF-2 | GACTCGGTACCCCGCGGATCACCACCTGGATGC |
| GGDEF-4 | CTCGGATCGATCTTGATGAACTGCA |
| GGDEF-5 | GAGCGGTACCCATCGCGATCCTCCAGCAGG |
| EAL | CATAGTAATGAGGTACCTCATTACTATG |
| Ser-up | CGAGTGGTTTAAGGCAACGGTCTTGA |
| Ser-down | AGTTCGGCCTGGTGGAGCAACTCG |
| GDSIF/AASIF forward | GCCGACCTGGCGCGTTTCGCCGCTTCGATCTTCGCCGCC |
| GDSIF/AASIF reverse | GGCGGCGAAGATCGAAGCGGCGAAACGCGCCAGGTCGGC |
| EVL/AAA forward | CGGCGACAGCCACGAGAACTATGCAGCTGCTCTACGCCTCCTCAATCCGCAGGGCC |
| EVL/AAA reverse | GGCCCTGCGGATTGAGGAGGCGTAGAGCAGCTGCATAGTTCTCGTGGCTGTCGCCG |
All primers are listed 5′ to 3 ′.