Table 1. Thermodynamics of binding of cJun analogues to cFos. Columns (from left to right) show i) Tm values from thermal denaturation analysis ii) calculated % helicity for each respective pair calculated from circular dichroism spectra and iii) KD values calculated from thermal denaturation data.
Peptide complex | Tm °C | % Helical | KD(20) (Thermal) µM | *KD(20) M−1 (ITC) µM | N | ΔG(20) kcal/mol (ITC) | ΔH kcal/mol | #TΔS kcal/mol [ΔH – ΔG] |
cFos-cFos | −1 | 20% | 325 | N/D | N/D | N/D | N/D | N/D |
cFos-JunWCANDI | 44 | 42% | 0.45 | 1.2±0.05 | 0.8±0.01 | −7.9±0.03 | −14.8±0.3 | −6.9±0.3 |
cFos-1 | 55 | 65% | 0.50 | 0.39±0.03 | 0.8±0.01 | −8.6±0.04 | −11.6±0.1 | −3.0±0.1 |
cFos-2 | 53 | 39% | 0.19 | 1.44±0.09 | 1.2±0.01 | −7.8±0.04 | −7.1±0.1 | +0.7±0.1 |
cFos-8 | 32 | 38% | 21.5 | 55±12.45 | 1.0±0.35 | −5.7±0.13 | −9.5±0.4 | −3.8±0.4 |
cFos-9 | 38 | 47% | 9.2 | N/A | N/A | N/A | N/A | N/A |
cFos-10 | 49 | 52% | 1.7 | 5.8±0.78 | 0.8±0.01 | −7.0±0.08 | −8.4±0.9 | −1.4±0.9 |
cFos-11 | 47 | 55% | 5.8 | 5.4±0.28 | 0.7±0.01 | −7.0±0.03 | −7.7±0.2 | −0.7±0.2 |
cFos-12 | 52 | 40% | 1.2 | 7.6±0.51 | 1.0±0.02 | −6.8±0.04 | −6.1±0.2 | 0.7±0.2 |
cFos-17 | 44 | 40% | 7.8 | 11.4±0.88 | 1.0±0.03 | −6.6±.0.05 | −5.4±0.3 | 1.2±0.3 |
cFos-20 | 48 | 49% | 3.8 | 11.2±0.82 | 1.1±0.03 | −6.6±0.04 | −7.5±0.3 | −0.9±0.3 |
cFos-22 | 51 | 40% | 1.4 | 11.9±1.16 | 1.4±0.04 | −6.6±0.06 | −5.0±0.2 | 1.6±0.2 |
cFos-24 | 58 | 52% | 7.2 | 7.25±0.64 | 1.1±0.03 | −6.9±0.05 | −8.8±0.4 | −1.9±0.4 |
The remaining three columns give stoichiometry of binding and thermodynamic data calculated from ITC, with TΔS calculated according to the Gibbs Helmholtz equation.
data calculated using the midpoint of the transition from thermal denaturation profiles (and fit as temperature as a function of lnKD, with the fit lnKD = aT+C where a is the gradient, T is the temperature in Celsius and C is the intercept) and calculated at 20°C.
Calculated according to TΔS = ΔH−ΔG.