Table 1.
Location-wise distribution of full-length and Pfam-mapped protein sequences
| SL dataset | Pfam dataset | ||
|---|---|---|---|
|
Organelle |
Code |
# of protein sequences |
# of Pfam sequences |
| Cytoskeleton |
CSK |
259 |
200 |
| Cytoplasm |
CYT |
3334 |
2809 |
| Endoplasmic Reticulum |
END |
1016 |
884 |
| Extracellular |
EXC |
8666 |
6393 |
| Golgi apparatus |
GOL |
291 |
248 |
| Lysosome |
LYS |
159 |
138 |
| Mitochrondria |
MIT |
2760 |
2383 |
| Nuclear |
NUC |
5104 |
4221 |
| Plasma membrane |
PLA |
6852 |
6155 |
| Perixosome | POX | 212 | 190 |
SL- Subcellular Localization; Pfam- Protein family database.