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. Author manuscript; available in PMC: 2013 Mar 28.
Published in final edited form as: Pediatr Res. 2012 Jan;71(1):107–114. doi: 10.1038/pr.2011.14

Table 3.

SNPs present upstream and downstream of the two significant SNPs (rs3771150 and rs3771171)

CHR SNP CHR position Alleles Frequency in Cases Frequency in Controls p-value
2 rs974389 102303413 C/T 0.3235 0.3557 0.7116
2 rs12712141 102319499 C/T 0.5294 0.4375 0.2933
2 rs1041973 102321900 A/C 0.2812 0.5106 0.02247
2 rs1420101 102324148 A/G 0.5882 0.3814 0.02044
2 rs12712142 102327016 A/C 0.5588 0.3866 0.04901
2 rs1921622 102332499 A/G 0.5588 0.2526 0.000525
2 rs10208293 102332742 G/A 0.6176 0.4794 0.1404
2 rs4988955 102334360 A/G 0.5 0.2835 0.009945
2 rs4988956 102334439 G/A 0.5 0.2835 0.009945
2 rs10192036 102334643 C/A 0.5 0.2835 0.009945
2 rs10204137 102334644 A/G 0.5 0.2835 0.009945
2 rs10192157 102334788 C/T 0.5 0.2835 0.009945
2 rs10206753 102334794 T/C 0.5 0.2835 0.009945
2 rs13015714 102338297 G/T 0.05882 0.1094 0.3399
2 rs3755276 102344891 G/A 0.5882 0.3402 0.005714
2 §rs3771171 102352382 G/A 0.375 0.09278 5.75E-06
2 rs7579737 102353793 G/A 0.2353 0.3053 0.3804
2 rs2270297 102359107 A/G 0.1176 0.1031 0.786
2 rs7558013 102359238 T/G 0.1471 0.2577 0.1678
2 rs4851004 102375969 C/T 0.5625 0.2553 0.000791
2 rs2293225 102402321 T/C 0.2647 0.07216 0.000263
2 rs6743516 102402767 A/G 0.5588 0.2577 0.000635
2 rs13021177 102422925 A/G 0.6176 0.3802 0.003749
2 rs17027173 102423475 A/G 0.1471 0.2552 0.1681
2 §rs3771150 102427283 T/C 0.3824 0.09794 3.87E-06
2 rs11465730 102433290 A/G 0.3235 0.4639 0.126
2 rs11886793 102438652 G/T 0.2647 0.3802 0.1891

These are within 50kb upstream and downstream the two significant SNPs. Their chromosome (CHR) position, frequency in cases and controls, and p-values are shown;

§

The two significant SNPs are shown in bold; minor alleles are underlined.