Table 1.
Summary of cistrome, epigenome and transcriptome datasets included in the NRCistrome web interface.
| Species | Factor number | Factor | Dataset number | |
|---|---|---|---|---|
| Nuclear receptor | Human | 10 | AR, ESR1, ESR2, HNF4A, NR3C1, PGR, RARA, RARG, RXR, VDR | 66 |
| Mouse | 7 | ESRRB, HNF4A, NR1H2, NR3C1, PPARG, RAR, RXR | 22 | |
| Collaborating factor | Human | 18 | CDX2, CEBP, CTCF, ERG, FoxA1, FoxA2, GABP, GATA3, GATA6, PML, PolII, RAD21, SRC-3, STAG1, TRIM24, c-Fos, c-Jun, c_MYC | 82 |
| Mouse | 6 | CEBP, FoxA2, Oct2, PDX1, PU1, PolII | 39 | |
| Epigenome | Human | 12 | Ace_H3, H3K14ac, H3K27me3, H3K36me3, H3K4me1, H3K4me2, H3K4me3, H3K9K14ac, H3K9ac, H3K9me3, H3R17me2, Pan-H3 | 75 |
| Mouse | 3 | H3K4me1, H3K4me3, H3K9ac | 19 | |
| Transcriptome | Human | 9 | AR, ESR1, ESR2, HNF4A, NR3C1, PGR, RARA, RARG, VDR | 35 |
| Mouse | 3 | HNF4A, NR1H2, PPARG | 5 |