Table 2. Genes of B. australis belonging to the 22 protein familiesa that are novel in Bartonella and retained in all genomes examined here.
Start | End | Cluster | Length | Gene | Locus tagb | Product |
200471 | 201322 | - | 852 | - | BAnh101740 | cell wall hydrolase SleB |
261494 | 262090 | - | 597 | exo | BAnh102240 | phage-related exonuclease |
399858 | 401213 | - | 1356 | - | BAnh103270 | sodium/dicarboxylate symporter |
407515 | 409218 | - | 1704 | - | BAnh103340 | hypothetical protein |
480201 | 480968 | - | 768 | cycH | BAnh103910 | cytochrome c-type biogenesis protein CycH |
611537 | 612700 | - | 1164 | - | BAnh104870 | putative virulence determinant |
673279 | 673557 | - | 279 | - | BAnh105340 | hypothetical protein |
753310 | 753801 | - | 492 | - | BAnh106010 | hypothetical protein |
992500 | 993066 | - | 567 | - | BAnh107950 | hypothetical protein |
1073527 | 1074066 | - | 540 | - | BAnh108550 | hypothetical DNA-binding protein |
1194931 | 1195851 | - | 921 | - | BAnh109520 | putative phage tail fiber protein |
1222495 | 1223091 | - | 597 | exo | BAnh109840 | phage-related exonuclease |
1368045 | 1368491 | BaGTA | 447 | - | BAnh110810 | hypothetical membrane protein |
1370722 | 1371693 | BaGTA | 972 | - | BAnh110850 | putative phage tail fiber protein |
1371690 | 1372802 | BaGTA | 1113 | - | BAnh110860 | hypothetical membrane protein |
1373314 | 1374777 | BaGTA | 1464 | - | BAnh110880 | hypothetical protein |
1375918 | 1377036 | BaGTA | 1119 | - | BAnh110910 | phage related protein |
1377179 | 1378018 | BaGTA | 840 | - | BAnh110920 | hypothetical protein |
1378067 | 1379929 | BaGTA | 1863 | - | BAnh110930 | putative phage portal protein |
1379929 | 1381272 | BaGTA | 1344 | - | BAnh110940 | phage terminase, large subunit |
1382071 | 1382400 | BaGTA | 330 | - | BAnh110950 | hypothetical protein |
1395225 | 1395860 | ROR | 636 | exo | BAnh111070 | phage-related exonuclease |
1396315 | 1396704 | ROR | 390 | - | BAnh111090 | hypothetical protein |
1397835 | 1398893 | ROR | 1059 | - | BAnh111110 | phage related protein |
1428420 | 1429094 | - | 675 | thiE2 | BAnh111430 | thiamine-phosphate pyrophosphorylase ThiE |
With protein families, we mean families of homologous proteins as identified during the clustering of all CDSs in the 16 Bartonella genomes and the outgroup species. Some families contain proteins encoded by single-copy genes whereas other families are larger and contain several paralogous proteins.
Locus tags for genes located in clusters in BaGTA or ROR are marked in bold.