Table 2. Summary of whole genome extended haplotype homozygosity tests.
Chr | Tests on CH (n)a | P-value<0.05 (n) | P-value<0.01(n) |
1 | 1177 | 29 | 10 |
2 | 895 | 30 | 5 |
3 | 898 | 36 | 7 |
4 | 807 | 27 | 9 |
5 | 594 | 19 | 8 |
6 | 822 | 31 | 9 |
7 | 681 | 17 | 7 |
8 | 784 | 32 | 5 |
9 | 610 | 19 | 6 |
10 | 640 | 21 | 2 |
11 | 766 | 27 | 8 |
12 | 456 | 22 | 2 |
13 | 579 | 20 | 5 |
14 | 614 | 15 | 6 |
15 | 569 | 25 | 2 |
16 | 540 | 12 | 5 |
17 | 511 | 14 | 7 |
18 | 345 | 15 | 3 |
19 | 369 | 14 | 3 |
20 | 466 | 14 | 2 |
21 | 401 | 16 | 1 |
22 | 436 | 16 | 2 |
23 | 326 | 15 | 0 |
24 | 360 | 15 | 2 |
25 | 333 | 11 | 3 |
26 | 325 | 8 | 0 |
27 | 264 | 6 | 3 |
28 | 214 | 7 | 0 |
29 | 253 | 8 | 3 |
Total | 16035 | 541 | 125 |
: Core haplotypes involved in each core region determined by Sweep across genome.