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. 2013 Mar 29;8(3):e60345. doi: 10.1371/journal.pone.0060345

Table 2. Comparison of non-coding sequence motifs between HAdV-B14p1 strains BJ430 and 303600.

MOTIF function BJ430 303600 bp
CATCAT...TGACGT inverted terminal repeat 1–136 1–136 136
ATAATATACC DNApol-pTP bingding site 9–18 9–18 10
TGGAATGGTGCCAA NFI bingding site 26–39 26–39 14
ctgtgtgg Sp1 recognition site 72–79 72–79 8
TATTTA TATA signal for E1A 493–498 493–498 6
AATAAA polyA signal for E1A 1517–1522 1517–1522 6
TATATA TATA signal for E1B 1574–1579 1574–1579 6
AGTAAA polyA signal for E1B 3467–3472 3467–3472 6
TAAGGT TATA signal for IX 3415–3420 3415–3420 6
AAAAAT polyA signal for IX 3470–3475 3470–3475 6
TTGATT polyA signal for IVa2 3963–3968 3963–3968 6
TGATTGGCTT inverted CAAT box for MLP 5858–5867 5858–5867 10
TTCACGTGA upstream element for MLP 5877–5885 5878–5886 9
GCTGGGGGGG MAZ bingding site for MLP 5898–5907 5899–5908 10
TATAAAA TATA signal for major late promoter(MLP) 5908–5914 5909–5915 7
GGGGGCGGTTC MAZ/SP1 bingding site for MLP 5915–5925 5916–5926 11
TCACTGT initiator element for MLP 5937–5943 5938–5944 7
TTGTCAGTTTC DE1 for MLP 6024–6034 6025–6035 11
AACGAGGAGGATTTGA DE2a & DE2b for MLP 6039–6054 6040–6055 16
AATAAA polyA signal for L1 13626–13631 13624–13629 6
AATAAA polyA signal for L2 17337–17342 17335–17340 6
AATAAA polyA signal for L3 21781–21786 21780–21785 6
AATAAA polyA signal for E2A 21793–21798(-) 21792–21797(-) 6
TATAAA TATA box for E3 26856–26861 26855–26860 6
AATAAA polyA signal for L4 27335–27340 27334–27339 6
AATAAA polyA signal for E3 30597–30602 30597–30602 6
AATAAA polyA signal for L5 31763–31768 31763–31768 6
AATAAA polyA signal for E4 31779–31784 31779–31784 6
TATATATA TATA box for E4 34453–34460 34454–34461 8
AACCTC…ATGATG inverted terminal repeat 34626–34762 34627–34763 137

Nucleotide signatures and putative functions are indicated, along with locations noted for the genome.