Table 1. Sample incubation conditions and pyrotag yields.
Sample Name | Avg. Temp. (°C)a | Site | Enrichment | Incubation Location | Ni c | Nf d |
UW | 81 | Water | None | nab | nab | 11,233 |
U77 | 74 | 77 | None | nab | nab | 11,308 |
U85 | 83 | 85 | None | nab | nab | 14,516 |
77AS | 77 | 77 | Aspen | Sediment | 29,188 | 21,006 |
77AW | 77 | 77 | Aspen | Water | 25,528 | 18,924 |
77CS | 77 | 77 | Corn Stover | Sediment | 17,266 | 12,128 |
77CW | 77 | 77 | Corn Stover | Water | 14,527 | 10,565 |
85AS | 85 | 85 | Aspen | Sediment | 7,094 | 4,842 |
85AW | 85 | 85 | Aspen | Water | 12,167 | 8,259 |
85CS | 85 | 85 | Corn Stover | Sediment | 20,416 | 12,868 |
85CW | 85 | 85 | Corn Stover | Water | 32,241 | 21,349 |
Average temperature of natural samples or as recorded during incubation (Figure 1).
na, not applicable.
Number of pyrotags generated by pyrosequencing.
Number of quality-filtered pyrotags used in analysis.