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. Author manuscript; available in PMC: 2013 Mar 31.
Published in final edited form as: Arthritis Rheum. 2008 May;58(5):1377–1388. doi: 10.1002/art.23370

Table 1.

Primer sequences for RT-PCR gene expression analysis

Gene Sense Primer Anti-sense Primer
COL10A1 GCTTCAGGGAGTGCCATCATC CTCACATTGGAGCCACTAGGAATC
COL1A1 ATGGGAGGAGAGCGTGTG GAGGTCGGAGAGCAGAGG
COL2A1 CCACACTCAAGTCCCTCAAC GCTGCTCCACCAGTTCTTC
FGFR1 CCCAGCCACAACCCAGAGG TGCCAGGTCTCGGTGTATGC
FGFR2 CATCCTGTGCCGAATGAAGAAC TGAAGAGAGGCGTGTTGTTATCC
FGFR3 GCTAACACCACCGACAAGGAG CACCACCAGGATGAACAGGAAG
HPRT CGAGATGTGATGAAGGAGATGG GCAGGTCAGCAAAGAATTTATAGC
IHH CCTCAGTTGATGCTGCTAAATTC AACAGTCTCTGGATGTGTCTTG
MMP-13 GGACCCTGGAGCACTCATGTTTC TCGGAGACTGGTAATGGCATCAAG
Osteocalcin AGGAGGGCAGCGAGGTAG GAAAGCCGATGTGGTCAGC
p21 TCCTCATCCCGTGTTCTC GAATTTCATAACCGCCTGTG
p53 GGAGCACTAAGCGAGCACTG ATGGCGGGAGGTAGACTGAC
PTHrP CGACGACACACGCACTTGAAAC CGACGCTCCACTGCTGAACC
PTHrPR CCCGCCTACTGCCCACTG GCCGTTGAGGAACCCATCG
RAR-α GGCTTCACCACCCTCACCATC CGTCTCCGCATCATCCATCTCC
RAR-γ ACCCAGTATGTAGAAGCCAGTC GCTGCGGTGTGAGAGTCC
RUNX2 ATACCGAGTGACTTTAGGGATGC AGTGAGGGTGGAGGGAAGAAG
SOX9 GCAGGCGGAGGCAGAGGAG GGAGGAGGAGTGTGGCGAGTC
VEGF GGCGAAGAGAAGAGACACATTG AGGAAGGTCAACCACTCACAC

Abbreviations: COL10A1, collagen type X α1; COL1A1, collagen type I α1; COL2A1, collagen type II α1; FGFR1-3, fibroblast growth factor receptor types 1-3; HPRT, hypoxanthine guanine phosphoribosyl transferase; IHH, Indian hedgehog; MMP-13, matrix metalloproteinase 13; PTHrP, parathyroid hormone related peptide; PTHrPR, PTHrP-receptor; RAR-α and -γ, retinoic acid receptor-α and -γ; RUNX2, runt related transcription factor 2; SOX9, SRY (sex determining region Y)-box 9; VEGF, vascular endothelial growth factor