Table 1. Summary of the exome sequencing data and the identified single nucleotide variants.
iPSC lines | # Total reads (M) | # Unique reads (M) | # Heterozygous variants | % in dbSNP | Reads of variants |
MK4 | 130.9 | 54.5 | 6150 | 97 | 23 |
MK5 | 127.1 | 51.8 | 24943 | 97 | 50 |
MK7 | 125.0 | 51.3 | 24907 | 97 | 50 |
MK8 | 143.4 | 58.7 | 25935 | 97 | 54 |
MK9 | 194.6 | 79.8 | 28150 | 97 | 72 |
OS1 | 89.6 | 36.8 | 19400 | 97 | 38 |
OS3 | 142.5 | 58.4 | 26142 | 97 | 56 |
OS5 | 141.0 | 58.0 | 25753 | 97 | 54 |
OS6 | 143.8 | 59.2 | 26247 | 97 | 55 |
OS7 | 124.8 | 51.2 | 24425 | 97 | 49 |
Z1 | 148.7 | 61.2 | 26187 | 97 | 59 |
Z2 | 126.7 | 52.2 | 23747 | 97 | 52 |
Z5 | 153.8 | 63.1 | 26277 | 97 | 61 |
Z6 | 154.3 | 62.8 | 26422 | 97 | 62 |
Z7 | 145.3 | 60.1 | 26046 | 97 | 59 |
The numbers of heterozygous variants are those that have a minimum of 5× coverage. The dbSNP percentage represents the portion of identified variants present in the Single Nucleotide Polymorphism Database.