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. 2013 Apr 2;8(4):e60300. doi: 10.1371/journal.pone.0060300

Table 2. Proteomic profile of erythroid cytoskeletal protein distribution in sorted populations of reticulocytes and extruded nuclei.

Nuclei Reticulocytes
Accession Description Total peptides Unique peptides Total peptides Unique peptides
Q00013 55 kDa erythrocyte membrane protein 27 15 93 27
P68032 Actin, alpha cardiac muscle 116 16 127 15
P60709 Actin, cytoplasmic 223 25 228 24
P61160 Actin-related protein 2 6 5 22 11
O15143 Actin-related protein 2/3 complex subunit 1B 2 2 14 7
O15144 Actin-related protein 2/3 complex subunit 2 4 3 25 11
P61158 Actin-related protein 3 12 9 44 15
O43707 Alpha-actinin-4 4 4 12 7
P35611 Alpha-adducin 9 5 78 20
P16157 Ankyrin-1 123 65 476 104
E9PE32 Ankyrin-3 8 5 31 9
Q562R1 Beta-actin-like protein 2 41 6 46 6
P35612 Beta-adducin 72 25
B1AK87 Capping protein (Actin filament) muscle Z-line, beta 10 4 43 12
Q96H99 Cortactin 1 1 20 13
Q08495 Dematin 16 10 83 21
A8K8J9 Dynactin 2 (P50), isoform CRA_b 6 5 32 16
Q4KKX0 Erythrocyte membrane protein band 4.2 30 13 164 40
P21333 Filamin-A 27 23 94 66
Q9UEY8 Gamma-adducin 14 7
A2A418 Gelsolin 23 9 15 7
P33176 Kinesin-1 heavy chain 17 12
Q15691 Microtubule-associated protein RP/EB family member 1 5 3 12 8
P12829 Myosin light chain 4 10 5 24 8
P60660 Myosin light polypeptide 6 3 1 4 3
Q3MIV8 Myosin, heavy chain 11, smooth muscle 12 9 43 19
P35580 Myosin-10 48 38 210 106
Q7Z406 Myosin-14 10 8 25 12
P35579 Myosin-9 75 54 373 124
P11171 Protein 4.1 38 17 159 33
P02549 Spectrin alpha chain, erythrocyte 138 87 735 176
P11277 Spectrin beta chain, erythrocyte 105 70 637 165
Q9Y490 Talin-1 66 48 224 102
Q9Y4G6 Talin-2 6 6 24 11
P28289 Tropomodulin-1 4 4 32 16
D9YZV5 Tropomyosin 1 (Alpha) isoform 4 9 5 10 4
Q5VU58 Tropomyosin 3 19 9 37 12
P06753 Tropomyosin alpha-3 chain 11 6 18 6
Q71U36 Tubulin alpha-1 chain 61 13 141 21
P07437 Tubulin beta chain 89 23 249 28
A8MUB1 Tubulin, alpha 1 (Testis specific) 49 9 119 20
B3KPW9 Tubulin, alpha 8 33 7 80 13
B3KS31 Tubulin, beta 6 23 7 61 9
P18206 Vinculin 9 6 57 35

Sorted populations of reticulocytes and extruded nuclei were fractionated by 1D SDS-PAGE and subjected to Nano LC mass spectrometry. An abridged list containing key cytoskeletal proteins of interest is shown. Total peptide column is the total number of peptides (and therefore an indication of a particular protein’s abundance) detected in the population, whilst the unique peptide column indicates the number of unique peptides detected. To assess differences between nuclei and reticulocyte populations the total peptide number should be used.