Kd1
|
dissociation constant of LuxR to A
|
100 nM
|
[41]
|
|
unbinding rate of LuxR to A
|
10 min−1
|
estimated
|
Kd2
|
dissociation constant of LuxR·AI dimerization
|
20 nM
|
fitted
|
|
dissociation rate of dimer (LuxR·AI)2
|
1 min−1
|
estimated
|
kA
|
synthesis rate of A by LuxI
|
0.04 min−1
|
fitted
|
Kdlux
|
dissociation constant of (LuxR·AI)2 to the lux promoter
|
200 nM
|
fitted
|
|
dissociation rate of (LuxR·AI)2 to the lux promoter
|
10 min−1
|
estimated
|
b
|
burst size
|
20
|
[38]
|
kR
|
transcription rate of luxR
|
200/bmin−1
|
fitted
|
kI
|
transcription rate of luxI
|
50/bmin−1
|
fitted
|
pR
|
translation rate of luxR mRNA
|
bdmRmin−1
|
|
pI
|
translation rate of luxI mRNA
|
bdmImin−1
|
|
αR
|
ratio between unactivated and activated rate of expression of luxR
|
0.001
|
fitted
|
αI
|
ratio between unactivated and activated rate of expression of luxI
|
0.01
|
fitted
|
dA
|
degradation rate of A (same inside and outside the cell)
|
0.001 min−1
|
[42]
|
|
degradation rate of (LuxR·AI)2
|
0.002 min−1
|
estimated
|
dC
|
degradation rate of LuxR·AI
|
0.002 min−1
|
estimated
|
dR
|
degradation rate of LuxR
|
0.002 min−1
|
estimated
|
dI
|
degradation rate of LuxI
|
0.01 min−1
|
estimated
|
dmR
|
degradation rate of luxR mRNA
|
0.347 min−1
|
[43]
|
dmI
|
degradation rate of luxI mRNA
|
0.347 min−1
|
[43]
|
D
|
effective diffusion rate of A through the cell membrane
|
10 min−1
|
[44]
|
τ
|
cell cycle duration (doubling time) in RM/succinate at 30 C
|
45 min
|
[10]
|
λ
|
relative weight between the det./sto. components of the cell cycle
|
0.8
|
[33,45]
|
V0
|
cell volume at the beginning of cell cycle
|
1.5 μm3
|
[46]
|
Vtot
|
total cell culture volume |
2·10−4μl
|
|