Table 1.
Speciesa | Accession numberb |
Sequence/ DBc |
Typed | %IDe |
---|---|---|---|---|
Clade I | ||||
Trichuris muris | BM277412 | E | 1 | 42 |
Trichuris trichiura | CAB46355 | P | 1 | 43 |
Trichinella pseudospiralis | AAL12630 | P | 1 | 42 |
Trichinella spiralis | CAB46354 | P | 1 | 41 |
Xiphinema index | CV507928 | E | 1 | 40 |
Clade III | ||||
Anisakis simplex | EH005411 | E | 2 | 40 |
Ascaris lumbricoides | BU586680 | E | 1 | 40 |
Ascaris suum | BAD24819 | P | 1 | 40 |
Toxocara canis | BQ458133 | E | 1 | 39 |
Brugia malayi | AAB60943 | P | 1 | 40 |
Brugia malayi | AAF91074 | P | 2 | 40 |
Dirofilaria immitis | BQ482396 | E | 1 | 38 |
Onchocerca volvulus | AAK66563 | P | 1 | 43 |
Onchocerca volvulus | AAK66564 | P | 2 | 41 |
Wuchereria bancrofti | AAC82615 | P | 1 | 40 |
Clade IV | ||||
Heterodera schachtii | CF100446 | E | 2 | 35 |
Heterodera glycines | CD749065 | E | 2 | 35 |
Meloidogyne hapla | CF804195 | E | 1 | 26 |
Meloidogyne incognita | CK984698 | E | 1 | 18 |
Radopholus similis | CO961429 | E | 2 | 36 |
Parastrongyloides trichosuri | BM513256 | E | 2 | 63 |
Strongyloides stercoralis | BG224821 | E | 2 | 28 |
Clade V | ||||
Ancylostoma caninum | AW626839 | E | 1 | 48 |
Ancylostoma caninum | ABU68338 | P | 2 | 63 |
Ancylostoma ceylanicum | CB190146 | E | 1 | 28 |
Ancylostoma ceylanicum | ABO31935 | P | 2 | 65 |
Dictyocaulus viviparus | EV854186 | E | 2 | 57 |
Haemonchus contortus | CB012470 | E | 1 | 51 |
Haemonchus contortus | CB015598 | E | 2 | 57 |
Ostertagia ostertagi | BQ457911 | E | 1 | 49 |
Teladorsagia circumcincta | CB043804 | E | 1 | 41 |
Caenorhabditis elegans (CeMIF-1) | NP_499536 | P | 1 | 100 |
Caenorhabditis elegans (CeMIF-2) | NP_506003 | P | 2 | 100 |
Caenorhabditis elegans (CeMIF-3) | NP_492069 | P | - | - |
Caenorhabditis elegans (CeMIF-4) | NP_500968 | P | - | - |
Nematodes are classified into five clades. Clade II is not shown because there are no genetic data available for any clade II species.
Accession numbers of all sequences are available on GenBank (http://www.ncbi.nlm.nih.gov).
Sequence/DB (database); E, expressed sequence tag(s) (EST) is known; P, a complete protein open reading frame cDNA is available.
MIF sequence type based on homology to either Caenorhabditis elegans MIF-1 (CeMIF-1; NP_499536) or MIF-2 (CeMIF-2; NP_506003).
Percent identity to either CeMIF-1 or CeMIF-2 based on BLASTP of translated amino acid sequences.