Table 1.
Comparison of differentially expressed miRNAs claimed to be positive (P < 0.0001) or negative (P > 0.0001) by Agilent data versus those declared to be positive or negative by the Solexa data.
| Normalization method | |||||
|---|---|---|---|---|---|
|
|
|||||
| None (+, −) | Median (+, −) | Quantile (+, −) | Cyclic loess (+, −) | Variance stablizing (+, −) | |
| Solexa | |||||
| + | 4, 21 | 5, 20 | 11, 14 | 10, 15 | 10, 15 |
| − | 3, 458 | 1, 460 | 5, 456 | 5, 456 | 4, 457 |
Note: The numbers of false positive and false negative miRNAs identified are indicated in bold for each normalization method.