Table 1. Sequencing data and purity.
Strain | Sequencing method | Total number of reads | Number of reads used for assembly | Avg. coverage in assembly | % Wolbachia reads* |
wHa | 454, single-end | 764.450 | 80.497 | 30x | 97.3 |
wHa | 454, 3 kb paired-end | 1.129.697 (702.509 pairs) | 164.007 (101.384 pairs) | 23x | 99.4 |
wHa | Illumina, paired-end | 14.297.126 | 1.462.711 | 225x | 97.9 |
wNo | 454, single-end | 793.407 | 142.884 | 40x | 99.3 |
wNo | 454, 3 kb paired-end | 1.141.093 (663.271 pairs) | 333.604 (166.199 pairs) | 38x | 99.5 |
wNo | Illumina, paired-end | 17.726.864 | 1.772.688 | 136x | 98.3 |
As estimated from mapping all reads to the complete Wolbachia genomes.