. 2013 Apr 4;9(4):e1003294. doi: 10.1371/journal.ppat.1003294

Table 1. Comparison between SIVmac239 and HIV-1_NL4-3 RNA genome secondary structure models.

	Codon- Aligned Bases	Base-Paired	Base-Paired In Both HIV and SIV	Base-Paired With Same Partner	Base-Paired With Similar Partner (w/in 40 nts.)	Single-Stranded	Single-Stranded In Both HIV and SIV
SIV	8490	4970	2421	142	432	4671	2420
HIV	8490	4500	2421	142	432	4672	2420

SHAPE-directed folding used ΔG _SHAPE parameters of m = 1.9 and b = −0.7.

Table 1. Comparison between SIVmac239 and HIV-1NL4-3 RNA genome secondary structure models.