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. 2013 Feb 15;288(14):10061–10072. doi: 10.1074/jbc.M112.421156

TABLE 1.

Primer sequences for pyrosequencing

Name (range)/direction/purpose (covering CpG sites) Sequence (5′ to 3′)
MMP13-Pyro-1 (−402/−188)
    Forward AATTAGTATTAAGTTTTTTTTTATGGAAGT
    Reverse TTCAACAAAATCTCAAAACCCATCTAA
    Sequencing 1 AAATTTTTTTTTTTTTACCTTCTAT
    Sequencing 2 CTCAAAACCCATCTAAC

MMP13-Pyro-2 (−210/+36)
    Forward ATGGGTTTTGAGATTTTG
    Reverse ACCCCTAAATACATCTTAAATA
    Sequencing 1 CAATCACTTAAAAATAAACATACTT
    Sequencing 2 AATAATACCTAAAAACTATTATC
    Forward ATGGAAGGGTAAGGAGTAGTAA

IL1B-Pyro-1 (−331/−175)
    Reverse CCCACATATACTAAATTTAAACATTCTT
    Sequencing ATACTAAATTTAAACATTCTTCTA

IL1B-Pyro-2 (−64/+65)
    Forward ATGAAGATTGGTTGAAGAGAATTTTAGA
    Reverse ATTTCTCAACCTCCTACTTCTACTTTTAA
    Sequencing ATTTTAGAGTAGTTTGTTGTG