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. 2013 Apr 5;8(4):e60736. doi: 10.1371/journal.pone.0060736

Table 6. Number of putative species delimited by the different species delimitation methods applied to the COI dataset: overall barcoding gap analysis (OGA), pairwise gap analysis (PGA), 3% threshold, stylommatophoran 4% threshold, 10× rule, 3.2–4.1× rule, ABGD method, SDP (Rosenberg’s PAB and Rodrigo’s P(RD)), GSI with both BI and ML trees and GMYC method.

Classical barcoding gap analysis ABGD SDP GSI GMYC
Putative species PAB P(RD)
OGA PGA 3% 4% 10× 3.2–4.1× BI ML BI ML BI ML BI
A + + + + + + + + + + +
B na na na na na na na na na na na na na na
C + + + + + + + + + + + + + +
D − (B) na + na +
Da * + + + + + + + + + + + +
Db * + + + + + + + +
E − (F) + +
Ea − (F)
Eb + + + + + +
Ea3-4 * + + + + + + + + + + + +
Eb1-4 * + + + + + + + + + + +
Eb5-8 * + + + + + + + + + +
F − (Ea) +
F+Ea1-2 * + + + + + + + + + + + + + +
R. saharica (S) + + + + + + + +
Sa + + + + + + + + + + + +
Sb + + + + + + + + + + + +
Species within R. decollata 7 or 8 7 or 8 7 8 5 8 7 4 4 6 or 7 6 7 or 8 6 or 8 8
Species within R. saharica 1 or 2 1 or 2 2 1 or 2 2 1 or 2 2 1 1 2 2 1 or 2 1 or 2 2
Species within Rumina 8 or 10 9 or 10 9 9 or 10 7 9 or 10 9 5 5 8 or 9 8 8 or 10 7 or 10 10

+: MOTU supported as a putative species;

−: no support as a putative species; empty cases: group is not suggested or cannot be analyzed by the method; parentheses: MOTU responsible for the absence of barcoding gap;

*

: additional MOTU defined by the COI data.