Table 1. Primers used for semi-quantitative PCR.
Organisms | Genes | Name | Sequence 5′ 3′ | References |
Lactobacillus | ef-Tu | ef-TuF | F_ TCGATGCTGCTCCAGAAGAAA | [9] |
ef-TuR | R_ TGGCATAGGACCATCAGTTGC | [9] | ||
eno | enoF | F_ CTACCTTGGCGGATTCAACG | [9] | |
gap | GDPH 423F | F_ ACTGAATTAGTTGCTATCTTAGAC | [76] | |
GDPH 423R | R_ GAAAGTAGTACCGATAACATCAGA | [76] | ||
groEl | groElF | F_ TTCCATGGCKTCAGCRATCA | [9] | |
groElR | R_ GCTAAYCCWGTTGGCATTCG | [9] | ||
srtA | srtAF | F_ ATGGGGCARGGTAACTACGC | [9] | |
srtAR | R_GCCCCGGTMTYATCACAGGT | [9] | ||
apf | apfF | F_ YAGCAACACGTTCTTGGTTAGCA | [8] | |
apfR | R_ GAATCTGGTGGTTCATAYWCAGC | [8] | ||
cnb | cnbF | F_ CGTGGAGAAGTCGGTGGATG | [9] | |
fpbA | cnbR | R_ CATTGCTATGACGCCGGAAC | [9] | |
fpbAF | F_ WGCYAAYCGGAAGAATCACC | [9] | ||
fpbAR | R_ ACCGAGTTCGTYRCGGGTCR | [9] | ||
mapA | Map 423F | F_ TGGATTCTGCTTGAGGTAAG | [76] | |
Map 423R | R_ GACTAGTAATAACGCGACCG | [76] | ||
mub1 | Mub 423F | F_ GTAGTTACTCAGTGACGATCAATG | [76] | |
Mub 423R | R_ TAATTGTAAAGGTATAATCGGAGG | [76] | ||
mub2 | mub2F | F_ ACGCGTATTGCGGGTAATGA | [9] | |
mub2R | R_ CGCCCCTGAAGTGGGATAGT | [9] | ||
16S rRNA for L. paraplantarum | 338r* | F_ CTGCTGCCTCCCGTAGGAGT* | [29] | |
Lpla72f | R_ ATCATGATTTACATTTGAGTG | [77] | ||
16S rRNA for L. fermentum | 338r* | F_ CTGCTGCCTCCCGTAGGAGT* | [29] | |
Lferm72f | R_ CCTGATTGATTTTGGTCGC | [78] | ||
16S rRNA for L. salivarius | 616 V | F_ AGAGTTTGATCCTGGCTCAG | [79] | |
spez92R | R_ GAATGCAAGCATTCGGTGTA | [79] | ||
16S rRNA for bacteria | 338f | F_ ACTCCTACGGGAGGCAGCAG | [29] | |
518r | R_ ATTACCGCGGCTGCTGG | [29] | ||
MUC1 | rMuc1 | F_ GAGTGAATATCCTACCTACCAC | [30] | |
rMuc1 | R_ TTCACCAGGCTAACGTGGTGAC | [30] | ||
MUC2 | rMuc2 | F_ GCCAGATCCCGAAACCA | [30] | |
rMuc2 | R_ TATAGGAGTCTCGGCAGTCA | [30] | ||
MUC3 | rMuc3 | F_ AACTTCCAGCCCTCCCTAAG | [30] | |
rMuc3 | R_ GCTTCCAGCATCGTCTCTCT | [30] | ||
TFF-3 | rTFF-3 | F_ TTTGACTCCAGCATCCCA | [30] | |
rTFF-3 | R_ CGCAATTAGAACAGCCTTG | [30] | ||
RELM-β | rRELM-β | F_ TTCCTTCTCTCGCTGATGGT | [30] | |
rRELM-β | R_ GCAGTGGCAAGTAGTTCCAT | [30] | ||
GAPDH | rGAPDH | F_ TGACAACTCCCTCAAGATTGTCA | [30] | |
rGAPDH | R_ GGCATGGACTGTGGTCATGA | [30] |
The primers from the literature were converted into their reverse complement.