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. 2013 Apr 5;8(4):e57711. doi: 10.1371/journal.pone.0057711

Table 1. Primers used for semi-quantitative PCR.

Organisms Genes Name Sequence 5′ 3′ References
Lactobacillus ef-Tu ef-TuF F_ TCGATGCTGCTCCAGAAGAAA [9]
ef-TuR R_ TGGCATAGGACCATCAGTTGC [9]
eno enoF F_ CTACCTTGGCGGATTCAACG [9]
gap GDPH 423F F_ ACTGAATTAGTTGCTATCTTAGAC [76]
GDPH 423R R_ GAAAGTAGTACCGATAACATCAGA [76]
groEl groElF F_ TTCCATGGCKTCAGCRATCA [9]
groElR R_ GCTAAYCCWGTTGGCATTCG [9]
srtA srtAF F_ ATGGGGCARGGTAACTACGC [9]
srtAR R_GCCCCGGTMTYATCACAGGT [9]
apf apfF F_ YAGCAACACGTTCTTGGTTAGCA [8]
apfR R_ GAATCTGGTGGTTCATAYWCAGC [8]
cnb cnbF F_ CGTGGAGAAGTCGGTGGATG [9]
fpbA cnbR R_ CATTGCTATGACGCCGGAAC [9]
fpbAF F_ WGCYAAYCGGAAGAATCACC [9]
fpbAR R_ ACCGAGTTCGTYRCGGGTCR [9]
mapA Map 423F F_ TGGATTCTGCTTGAGGTAAG [76]
Map 423R R_ GACTAGTAATAACGCGACCG [76]
mub1 Mub 423F F_ GTAGTTACTCAGTGACGATCAATG [76]
Mub 423R R_ TAATTGTAAAGGTATAATCGGAGG [76]
mub2 mub2F F_ ACGCGTATTGCGGGTAATGA [9]
mub2R R_ CGCCCCTGAAGTGGGATAGT [9]
16S rRNA for L. paraplantarum 338r* F_ CTGCTGCCTCCCGTAGGAGT* [29]
Lpla72f R_ ATCATGATTTACATTTGAGTG [77]
16S rRNA for L. fermentum 338r* F_ CTGCTGCCTCCCGTAGGAGT* [29]
Lferm72f R_ CCTGATTGATTTTGGTCGC [78]
16S rRNA for L. salivarius 616 V F_ AGAGTTTGATCCTGGCTCAG [79]
spez92R R_ GAATGCAAGCATTCGGTGTA [79]
16S rRNA for bacteria 338f F_ ACTCCTACGGGAGGCAGCAG [29]
518r R_ ATTACCGCGGCTGCTGG [29]
MUC1 rMuc1 F_ GAGTGAATATCCTACCTACCAC [30]
rMuc1 R_ TTCACCAGGCTAACGTGGTGAC [30]
MUC2 rMuc2 F_ GCCAGATCCCGAAACCA [30]
rMuc2 R_ TATAGGAGTCTCGGCAGTCA [30]
MUC3 rMuc3 F_ AACTTCCAGCCCTCCCTAAG [30]
rMuc3 R_ GCTTCCAGCATCGTCTCTCT [30]
TFF-3 rTFF-3 F_ TTTGACTCCAGCATCCCA [30]
rTFF-3 R_ CGCAATTAGAACAGCCTTG [30]
RELM-β rRELM-β F_ TTCCTTCTCTCGCTGATGGT [30]
rRELM-β R_ GCAGTGGCAAGTAGTTCCAT [30]
GAPDH rGAPDH F_ TGACAACTCCCTCAAGATTGTCA [30]
rGAPDH R_ GGCATGGACTGTGGTCATGA [30]
*

The primers from the literature were converted into their reverse complement.