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. 2013 Apr 5;8(4):e60120. doi: 10.1371/journal.pone.0060120

Table 1. Genome information.

Tax Organism INSDC WGS WGS for download Status
591001 Acidaminococcus fermentans DSM 20731 CP001859 Complete
568816 Acidaminococcus intestini RyC-MR95 CP003058 Complete
563191 Acidaminococcus sp D21 ACGB01 ACGB00000000 Scaffolds/contigs
888060 Centipeda periodontii DSM 2778 AFHQ01 AFHQ00000000 Scaffolds/contigs
592028 Dialister invisus DSM 15470 ACIM02 ACIM00000000 Scaffolds/contigs
888062 Dialister micraerophilus DSM 19965 AFBB01 AFBB00000000 Scaffolds/contigs
910314 Dialister microaerophilus UPII 345-E AENT01 AENT00000000 Scaffolds/contigs
158847 Megamonas hypermegale ART12 1 FP929048 Complete
907 Megasphaera elsdenii DSM 20460 HE576794 Complete
699218 Megasphaera genomosp type 1 str 28L ADGP01 ADGP00000000 Scaffolds/contigs
706434 Megasphaera micronuciformis F0359 AECS01 AECS00000000 Scaffolds/contigs
1000569 Megasphaera sp UPII 135-E AFUG01 AFUG00000000 Scaffolds/contigs
1000568 Megasphaera sp UPII 199-6 AFIJ01 AFIJ00000000 Scaffolds/contigs
500635 Mitsuokella multacida DSM 20544 ABWK02 ABWK00000000 Scaffolds/contigs
626939 Phascolarctobacterium succinatutensYIT 12067 AEVN01 AEVN00000000 Scaffolds/contigs
749551 Selenomonas artemidis F0399 AECV01 AECV00000000 Scaffolds/contigs
638302 Selenomonas flueggei ATCC 43531 ACLA01 ACLA00000000 Scaffolds/contigs
585503 Selenomonas noxia ATCC 43541 ACKT01 ACKT00000000 Scaffolds/contigs
879310 Selenomonas sp oral taxon 137 str F0430 AENV01 AENV00000000 Scaffolds/contigs
864563 Selenomonas sp oral taxon 149 str 67H29BP AEEJ01 AEEJ00000000 Scaffolds/contigs
546271 Selenomonas sputigena ATCC 35185 CP002637 ACKP02 ACKP00000000 Complete
401526 Thermosinus carboxydivorans Nor1 AAWL01 AAWL00000000 Scaffolds/contigs
866776 Veillonella atypica ACS-049-V-Sch6 AEDR01 AEDR00000000 Scaffolds/contigs
866778 Veillonella atypica ACS-134-V-Col7a AEDS01 AEDS00000000 Scaffolds/contigs
546273 Veillonella dispar ATCC 17748 ACIK02 ACIK00000000 Scaffolds/contigs
686660 Veillonella parvula ATCC 17745 ADFU01 ADFU00000000 Scaffolds/contigs
479436 Veillonella parvula DSM 2008 CP001820 Complete
457416 Veillonella sp 3 1 44 ADCV01 ADCV00000000 Scaffolds/contigs
450749 Veillonella sp 6 1 27 ADCW01 ADCW00000000 Scaffolds/contigs
879309 Veillonella sp oral taxon 158 str F0412 AENU01 AENU00000000 Scaffolds/contigs
944564 Veillonella sp oral taxon 780 str F0422 AFUJ01 AFUJ00000000 Scaffolds/contigs

Table listing the genomes used in the analysis. Data was downloaded from NCBI GenBank database. Abbreviations: Tax: NCBI taxonomy id number, Organism: Name of organism, INSDC: NCBI GenBank Accession number, WGS: NCBI Whole Genome Sequence Project number, Status: status of sequencing project. The WGS number can be used for downloading whole genome sequencing projects by removing the last two numbers and adding 6 zeros (ACGB01 is downloaded using the number ACGB000000).