Table 1. Genome information.
Tax | Organism | INSDC | WGS | WGS for download | Status |
591001 | Acidaminococcus fermentans DSM 20731 | CP001859 | – | – | Complete |
568816 | Acidaminococcus intestini RyC-MR95 | CP003058 | – | – | Complete |
563191 | Acidaminococcus sp D21 | – | ACGB01 | ACGB00000000 | Scaffolds/contigs |
888060 | Centipeda periodontii DSM 2778 | – | AFHQ01 | AFHQ00000000 | Scaffolds/contigs |
592028 | Dialister invisus DSM 15470 | – | ACIM02 | ACIM00000000 | Scaffolds/contigs |
888062 | Dialister micraerophilus DSM 19965 | – | AFBB01 | AFBB00000000 | Scaffolds/contigs |
910314 | Dialister microaerophilus UPII 345-E | – | AENT01 | AENT00000000 | Scaffolds/contigs |
158847 | Megamonas hypermegale ART12 1 | FP929048 | – | – | Complete |
907 | Megasphaera elsdenii DSM 20460 | HE576794 | – | – | Complete |
699218 | Megasphaera genomosp type 1 str 28L | – | ADGP01 | ADGP00000000 | Scaffolds/contigs |
706434 | Megasphaera micronuciformis F0359 | – | AECS01 | AECS00000000 | Scaffolds/contigs |
1000569 | Megasphaera sp UPII 135-E | – | AFUG01 | AFUG00000000 | Scaffolds/contigs |
1000568 | Megasphaera sp UPII 199-6 | – | AFIJ01 | AFIJ00000000 | Scaffolds/contigs |
500635 | Mitsuokella multacida DSM 20544 | – | ABWK02 | ABWK00000000 | Scaffolds/contigs |
626939 | Phascolarctobacterium succinatutensYIT 12067 | – | AEVN01 | AEVN00000000 | Scaffolds/contigs |
749551 | Selenomonas artemidis F0399 | – | AECV01 | AECV00000000 | Scaffolds/contigs |
638302 | Selenomonas flueggei ATCC 43531 | – | ACLA01 | ACLA00000000 | Scaffolds/contigs |
585503 | Selenomonas noxia ATCC 43541 | – | ACKT01 | ACKT00000000 | Scaffolds/contigs |
879310 | Selenomonas sp oral taxon 137 str F0430 | – | AENV01 | AENV00000000 | Scaffolds/contigs |
864563 | Selenomonas sp oral taxon 149 str 67H29BP | – | AEEJ01 | AEEJ00000000 | Scaffolds/contigs |
546271 | Selenomonas sputigena ATCC 35185 | CP002637 | ACKP02 | ACKP00000000 | Complete |
401526 | Thermosinus carboxydivorans Nor1 | – | AAWL01 | AAWL00000000 | Scaffolds/contigs |
866776 | Veillonella atypica ACS-049-V-Sch6 | – | AEDR01 | AEDR00000000 | Scaffolds/contigs |
866778 | Veillonella atypica ACS-134-V-Col7a | – | AEDS01 | AEDS00000000 | Scaffolds/contigs |
546273 | Veillonella dispar ATCC 17748 | – | ACIK02 | ACIK00000000 | Scaffolds/contigs |
686660 | Veillonella parvula ATCC 17745 | – | ADFU01 | ADFU00000000 | Scaffolds/contigs |
479436 | Veillonella parvula DSM 2008 | CP001820 | – | – | Complete |
457416 | Veillonella sp 3 1 44 | – | ADCV01 | ADCV00000000 | Scaffolds/contigs |
450749 | Veillonella sp 6 1 27 | – | ADCW01 | ADCW00000000 | Scaffolds/contigs |
879309 | Veillonella sp oral taxon 158 str F0412 | – | AENU01 | AENU00000000 | Scaffolds/contigs |
944564 | Veillonella sp oral taxon 780 str F0422 | – | AFUJ01 | AFUJ00000000 | Scaffolds/contigs |
Table listing the genomes used in the analysis. Data was downloaded from NCBI GenBank database. Abbreviations: Tax: NCBI taxonomy id number, Organism: Name of organism, INSDC: NCBI GenBank Accession number, WGS: NCBI Whole Genome Sequence Project number, Status: status of sequencing project. The WGS number can be used for downloading whole genome sequencing projects by removing the last two numbers and adding 6 zeros (ACGB01 is downloaded using the number ACGB000000).