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. 2013 Apr 5;8(4):e60120. doi: 10.1371/journal.pone.0060120

Table 2. Genome statistics.

Organism bp AT Std. AT Contig Unknown Largest N50
Acidaminococcus fermentans DSM 20731 2 329 769 44,16 1 100 2 329 769
Acidaminococcus intestini RyC-MR95 2 487 765 49,98 1 100 2 487 765
Acidaminococcus sp D21 2 238 973 49,80 0,03 79 6,2 43 082
Centipeda periodontii DSM 2778 2 650 230 44,02 0,04 71 8,4 72 349
Dialister invisus DSM 15470 1 895 860 54,50 0,03 2 99,9 1 894 898
Dialister micraerophilus DSM 19965 1 256 198 64,69 0,05 32 17,9 90 852
Dialister microaerophilus UPII 345-E 1 395 825 64,35 0,07 32 15,4 122 970
Megamonas hypermegale ART12 1 2 209 938 65,89 1 3,602 100 2 209 938
Megasphaera elsdenii DSM 20460 2 474 718 47,01 1 0,397 100 2 474 718
Megasphaera genomosp type 1 str 28L 1 726 197 53,95 0,03 34 12,2 156 177
Megasphaera micronuciformis F0359 1 765 374 54,56 0,04 49 24,8 142 252
Megasphaera sp UPII 135-E 1 440 762 61,19 0,04 46 0,001 12,0 63 822
Megasphaera sp UPII 199-6 1 242 998 53,26 0,04 38 12,0 96 055
Mitsuokella multacida DSM 20544 2 204 718 41,89 0,04 28 19,5 321 943
Phascolarctobacterium succinatutens YIT 12067 2 122 261 52,36 0,05 118 5,1 43 220
Selenomonas artemidis F0399 2 209 623 42,75 0,06 66 19,7 89 528
Selenomonas flueggei ATCC 43531 2 157 862 44,03 0,04 33 12,2 125 841
Selenomonas noxia ATCC 43541 2 039 467 44,13 0,05 56 14,2 106 401
Selenomonas sp oral taxon 137 str F0430 2 475 066 43,27 0,05 15 22,1 306 540
Selenomonas sp oral taxon 149 str 67H29BP 2 429 414 43,20 0,05 56 7,8 95 526
Selenomonas sputigena ATCC 35185 2 568 361 42,89 1 100 2 568 361
Thermosinus carboxydivorans Nor1 2 889 774 48,50 0,03 49 12,1 108 262
Veillonella atypica ACS-049-V-Sch6 2 053 871 61,03 0,04 63 10,3 80 793
Veillonella atypica ACS-134-V-Col7a 2 151 913 61,02 0,04 70 9,8 74 331
Veillonella dispar ATCC 17748 2 116 567 61,14 0,06 25 30,4 498 249
Veillonella parvula ATCC 17745 2 163 473 61,43 0,04 19 26,9 416 853
Veillonella parvula DSM 2008 2 132 142 61,37 1 100 2 132 142
Veillonella sp 3 1 44 2 156 561 61,36 0,04 31 18,0 282 953
Veillonella sp 6 1 27 2 169 785 61,33 0,04 22 15,8 257 597
Veillonella sp oral taxon 158 str F0412 2 176 752 61,05 0,04 21 19,3 366 615
Veillonella sp oral taxon 780 str F0422 1 731 014 60,55 0,03 75 14,0 73 892

Basic genome statistics for genome DNA sequences. Values of zero are marked by “−”. Abbreviations: Organism: Name of organism. Status: sequencing status of published project. bp: total number of base pairs in all DNA. AT: Percent of AT in DNA. Std. AT: Standard deviation in AT across DNA fragments. Contig: number of DNA fragments corresponding to replicons or contigs. Unknown: percentage of unknown bases (not A, T, C or G). Largest: size of largest contig as a percentage of total length. N50: weighted median statistic such that 50% of the entire assembly is contained in contigs or scaffolds equal to or larger than this value.