Table III. Gene ontology of DMR-associated genes.
Best GO | Category | Count | Total | p Valuea |
---|---|---|---|---|
Hypomethylated in memory T cells | ||||
GO:0007154 | Cell communication | 119 | 5560 | 3.49E−18 |
GO:0007165 | Signal transduction | 111 | 5142 | 2.65E−17 |
GO:0007242 | Intracellular signaling pathway | 55 | 1965 | 4.94E−14 |
GO:0007267 | Cell–cell signaling | 25 | 640 | 5.25E−11 |
GO:0032502 | Developmental process | 69 | 3347 | 1.20E−08 |
GO:0007275 | Multicellular organismal development | 53 | 2299 | 1.20E−08 |
GO:0032501 | Multicellular organismal process | 75 | 3822 | 2.33E−08 |
GO:0048731 | System development | 39 | 1605 | 5.67E−07 |
GO:0065007 | Biological regulation | 109 | 6731 | 7.44E−07 |
GO:0050789 | Regulation of biological process | 101 | 6140 | 1.22E−06 |
GO:0007215 | Glutamate signaling pathway | 6 | 21 | 3.93E−06 |
GO:0048519 | Negative regulation of biological process | 30 | 1182 | 7.67E−06 |
GO:0048856 | Anatomical structure development | 43 | 2005 | 8.94E−06 |
GO:0009966 | Regulation of signal transduction | 23 | 800 | 8.94E−06 |
GO:0048523 | Negative regulation of cellular process | 29 | 1137 | 8.96E−06 |
Hypomethylated in memory T cells | ||||
GO:0032502 | Developmental process | 19 | 3347 | 4.57E−06 |
GO:0065007 | Biological regulation | 29 | 6731 | 4.57E−06 |
GO:0050789 | Regulation of biological process | 27 | 6140 | 6.68E−06 |
GO:0016070 | RNA metabolic process | 21 | 4155 | 8.43E−06 |
Each category was based on a p value < 1.0E−05.