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. 2013 Apr 2;4:41. doi: 10.3389/fgene.2013.00041

Table 1.

The samples present in each of the clusters identified by the K-means analysis with K = 6. This was chosen because the silhouette analysis suggested that six clusters were the most appropriate (Figure 3). There were 33 human, 9 terrestrial animal, 10 mat community, 42 open water, 20 reef water, 60 coastal water, 5 deep water, 7 fresh water, 15 hypersaline, and 6 hot spring samples in total.

Cluster Number of metagenomes Original metagenome classification
1 52 31 Human
5 Terrestrial animals
6 Mat community
Water samples:
 4 Open marine
 3 Coral reef
 2 Coastal marine
 1 Fresh
2 1 1 Coral reef water sample
3 1 1 Coral reef water sample
4 3 1 Human
1 Fresh water
1 Coral reef water
5 149 4 Mat
4 Terrestrial animals
1 Human
Water samples:
 56 Coastal marine
 5 Deep marine
 15 Solar evaporation ponds
 6 Hydrothermal spring
 38 Open mainre
 13 Coral reef
 7 Freshwater
6 6 Water samples:
 2 Coastal marine
 3 Freshwater
 1 Coral reef