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. 2013 Apr 9;3:1583. doi: 10.1038/srep01583

Table 5. GoPubMed search results for the associations of complexes in cluster 10 with nerve tissue cancer. (Complexes with higher specificity are shown in the boldface.) Disease hits: number of PubMed papers indicating the association of searched item with diseases; neoplasms hits/rank: number of PubMed papers indicating the association of searched item with cancers and the rank of paper numbers in “All of Diseases” item of GoPubMed results. Association with nerve tissue cancer: number of PubMed papers indicating the association of searched item with nerve system diseases (box in the first row) and nerve system cancers (box in the second row) and the rank of paper numbers in “All of Diseases” and “Neoplasms by Site,” respectively.

        association with Nerve tissue cancer
complex name item searched disease hits neoplasms hits/rank disease hits/rank
Cell cycle kinase complex CDK5 CCND1 10111 8862/1 Retinoblastoma 983/3
        Nervous system neoplasms 204/9
RICH1-PAR3-aPKC polarity complex PARD3 49 20/1 Nervous system diseases 12/2
        Nervous system neoplasms 1/4
Emerin complex 52 Emerin 305 25/9 Nervous system diseases 250/2
        Nervous system neoplasms 1/7
BCL6-HDAC7 complex BCL6 758 684/1 Nervous system diseases 30/13
        Nervous sys neoplasms 15/5
Anti-HDAC2 complex HDACs 1047 641/1 Nervous system diseases 126/5
        Nervous sys neoplasms 7/9
RNA polymerase II complex, chro structure modifying RNA polymerase II complex 1529 568/2 Nervous system diseases 193/7
        Nervous sys neoplasms 13/7
SMARCA2/BRM-BAF57-MECP2 complex SMARCA2 112 81/1 Retinoblastoma 13/2
        Eye neoplasm 13/1
CDC2-CCNA2 complex CDC2 3777 2581/1 Eye diseases 464/4
        Eye neoplasm 444/1
  CCNA2 270 207/1 Eye diseases 25/4
        Eye neoplasm 22/4
CAV1-VDAC1-ESR1 complex VDAC1 99 45/1 Nervous sys diseases 31/2
        Neuroblastoma 5/2
  CAV1 880 382/1 Nervous sys diseases 143/3
        Nervous system neoplasms 12/7
TGF-beta receptor II-TGF-beta3 complex TGFB3 874 259/1 Nervous system diseases 89/11
        Nervous system neoplasms 9/8
Retrotranslocation complex GEMIN4 26 9/2 Nervous sys diseases 15/1
  SYVN1 36 8/5 Nervous sys diseases 9/5
TRAP complex Mediator complex 2518 805/1 Nervous system diseases 397/4
        Nervous system neoplasms 20/6
RAF1-RAS complex, EGF induced RAF1 271 174/1 Nervous system diseases 44/6
        Nervous system neoplasms 8/5
  Ras 31223 22723 Nervous system diseases 2166/12
        Nervous system neoplasms 881/8
APLG1-Rababtin5 complex Rab effec protein 141 38/1 Nervous sys diseases 19/5
WINAC complex SMARCA2 112 81/1 Nervous system diseases 11/8
        Retinoblastoma 13/1
  SMARCA4 219 155/1 Eye diseases 20/7
        Retinoblastoma 17/2
  SMARCB1 291 282/1 Nervous system diseases 121/2
        Nervous system neoplasms 116/1
SNARE complex (STX11, VAMP2, SNAP23) VAMP2 204 29/4 Nervous system diseases 41/3
MCM8-ORC2-CDC6 complex CDC6 208 104/1 Eye diseases 13/8
        Retinoblastoma 12/2