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. Author manuscript; available in PMC: 2013 Jul 1.
Published in final edited form as: Physiol Rev. 2012 Jul;92(3):1087–1187. doi: 10.1152/physrev.00032.2011

Table 1.

Inactivation of brain regions/neurotransmitter systems and effects on sleep-wake behavior

Brain Area/System Targeted Inactivation Technique Effect on Sleep-Wake and EEG
Brain stem
Midbrain/pontine reticular formation Transections in cat (136138, 580, 730, 1393). Loss of cortical activation during waking and REM sleep.
Cerveau isole mesencephalic transaction immediately caudal to the third nerve nuclei (effects contrast with encephale isole intact sleep-wake with transaction at C1 level of spinal cord). Loss of forebrain signs of REM sleep.
Brain stem damage in human patients (980). Coma.
Transection at caudal pontine or prebulbar level (1341, 1393). Loss of REM sleep and of the ability of pontine carbachol to elicit tonic and phasic REM components.
Electrolytic lesions in cat (730). Loss of cortical activation (not observed when lateral sensory pathways were interrupted). Coma like state.
Neurotoxic lesions ibotenic acid lesions in cat (302) or rat (758). Temporary increase in EEG slow waves but no long-term effects (cat). One week coma like state for combined PH/MPRF lesions. Recovery occurred. No effect (rat).
Dorsolateral pons including the dorsal subcoeruleus (=sublaterodorsal nucleus or peri-locus coeruleus alpha) or dorsal pontine nucleus oralis (PnO) Electrolytic (387, 388, 495, 498, 569, 893, 900, 1111, 1121, 1122). Very large lesions:
Neurotoxic kainic acid (577, 1122, 1394), ibotenic acid (758), NMDA (682, 683), hypocretin 2-saporin (100), quisqualic acid (606). Loss of REM sleep correlated with loss of cholinergic neurons.
Acute brain stem encephalitis with isolated inflammatory lesion in dorsomedial pontine tegmentum (including DRN, MR, PnO, LC, SubC, LDT, PPT) (810). Large lesions including the SubC and surrounding areas:
Pharmacological tetrodotoxin (1111, 1114). REM sleep behavior disorder (RBD) in humans, oneiric (dream-like) behavior in animals.
Idiopathic degeneration in humans (400, 1133). Smaller discrete lesions (focusing on SLD/SubC area):
REM without atonia in animals, increased limb movements during sleep.
GABA or muscimol (183, 1112, 1440, 1441) Wakefulness↑, NREM↓, REM sleep↓.
Norepinephrine (262), noradrenergic α2 agonist clonidine (1300), or dopamine acting on α2 receptors(263). Decreased REM and/or REM without atonia.
Noradrenergic β antagonist, propanolol (1301). REM↑ due to increased number of REM episodes.
Inhibition of adenylyl cyclase (799). REM sleep↑ (increased frequency of episodes).
Peribrachial pons (surrounding brachium conjunctivum): includes PPT/LDT, cuneiform nucleus, subcoeruleus (FTG in cat), medial and lateral parabrachial nucleus. Cooling, electrolytic or neurotoxic lesion in P-wave generation zone (277, 278, 604, 690, 691, 814, 1100). Loss of pontine component of PGO waves (P-waves). Reduced expression of learning related genes and proteins following active avoidance training. Reduced frequency of hippocampal theta and reduced synchronization between hippocampus and amygdala.
M2 receptor antagonist, methoctramine (283). Block of enhanced PGO-wave activity and REM-sleep like state induced by carbachol in the cat.
Serotonin (279) Inhibition of P-waves when injected into P-wave generator in dorsal subcoeruleus.
Medial parabrachial nucleus Neurotoxic: ibotenic acid (758). Wake 21%↓
Precoeruleus Neurotoxic: ibotenic acid (758). Loss of theta rhythm during REM
Ventral medulla (gigantocellular and magnocellular tegmental fields) Neurotoxic quisqualic acid in cat (514) or neonatal rat (606). Muscle tone↑ during NREM and REM sleep. Increased movements during REM sleep. Reduction in REM sleep and atonia duration during first postlesion week followed by recovery in weeks 2 and 3. Amount of remaining REM sleep correlated positively with ratio of remaining cholinergic or GABA neurons to serotonergic neurons.
Transection at ponto-medullary junction in decerebrate cat (1179) or injection of lidocaine into pontine reticular formation (652). Abolition of muscle atonia produced by electrical stimulation of medial medulla.
Brain stem cholinergic (PPT) Ibotenic acid (758). Wake 30%↓
Locus coeruleus (LC) Electrolytic lesion (576). No effect on REM sleep generation.
Scopolamine, minipump perfusion (1168). REM sleep↓ during the daytime (inactive period) in the rat.
GABAA agonist muscimol (959, 1303); Increased REM sleep with muscimol (due to increase in number of REM bouts) Possibly due to preferential inhibition of local GABAergic neurons.
GABAB receptor agonist baclofen into PPT/DpMe (370). Decreased REM sleep and memory consolidation with baclofen.
α2 Agonist, clonidine, α1 antagonist prazosin or β antagonist (958). REM sleep↑.
Adenylyl cyclase or protein kinase A inhibition (67, 282). REM sleep ↓ (due to decrease in number of episodes).
Serotonin (279, 1113). No effect on PGO waves.
Brain stem cholinergic (LDT) Ibotenic acid (758). LDT: increased fragmentation but no effect on amount of sleep.
Neurotoxic lesion: kainic acid (1394), ibotenic acid (758), dopamine-β- hydroxylase saporin (100).
Cooling (201) REM sleep ↑
RNAi knockdown of orexin 1 receptor (219). REM sleep during dark period↑
Microdialysis of α2 agonist clonidine (1096). Decreased activity of LC neurons. Waking ↓, NREM sleep ↑.
DSP-4 lesion (238, 244, 881). Reduced immediate-early and synaptic plasticity related gene expression.
Either no change in baseline sleep-wake (238, 244) or increase in REM (881).
Dorsal raphe nucleus (DRN) Electrolytic lesion (1451). No effect.
Neurotoxic lesion: ibotenic acid (758), 5,7-dihydroxytryptamine (757). No effect on amounts of sleep-wake.
GABAA receptor agonist, muscimol (926). REM sleep ↑.
Median raphe (MR) Electrolytic:(1451) Hippocampal theta rhythm ↑.
Pharmacological glutamatergic antagonists (629); GABAA agonist, muscimol (630), 5-HT1A receptor agonists (1364).
Dopamine- vPAG/DRN 6-OHDA or ibotenic acid (757). Marked decrease in waking (>20%), concomitant increase in sleep.
Ventrolateral periaqueductal gray (vlPAG) Electrolytic lesion in encephale isole cats (730). Cortical activation preserved.
Neurotoxic lesion: orexin 2-Saporin (612, 758) REM sleep ↑ in both normal and orexin KO animals.
Pharmacological muscimol in the cat (1120), rat (1118), and guinea pig (1336). Increased REM bouts and REM bout duration during dark period.
Lateral pontine tegmentum (LPT) = deep mesencephalic nucleus (DpMe) Electrolytic lesion in encephale isole cats (730). Cortical activation preserved.
Neurotoxic lesion orexin 2-saporin in the rat (758) and mouse (612). REM sleep ↑. Increased REM bouts during light period and occasional bouts of cataplexy.
Pharmacological muscimol in the cat (1120), rat (1118), and guniea pig (1336).
Superior colliculus/pretectum Aspiration (857) Abolition of lights off-induced increase in REM sleep.
Hypothalamus
Preoptic area/anterior hypothalamus Viral insult in humans (1378). Prolonged (>3 wk) and large suppression of sleep (both NREM and REM).
Electrolytic lesions in the cat (761, 840, 911) and neonatal rat (873).
Neurotoxic lesions in the cat: ibotenic (1105) or kainic acid (1255).
Lateral preoptic area/bed nucleus of the stria terminalis (BNST) Neurotoxic lesions in the rat. Ibotenic acid (1138) or NMDA (1201). Reduction in number of erections during REM sleep (1138). NREM sleep ↓ (1201).
Ventrolateral preoptic area (VLPO, core) Neurotoxic (rats). ibotenic acid (756). NREM 50–60%↓, REM sleep 59%↓, EEG delta power 60–70% ↓lasting at least 3 wk. Extent of lesion correlated with loss of NREM sleep. Sleep-wake fragmentation.
GABA/galanin-positive neurons
Extended VLPO (dorsomedial) Neurotoxic (rat). ibotenic acid (756). REM sleep 35% ↓, NREM sleep,15%↓, 25% loss of delta mainly during light period. Extent of lesion correlated with loss of REM sleep.
Ventromedial preoptic area Neurotoxic (rat). ibotenic acid (756), NMDA (563, 1201). No effect on sleep-wake (756). Reduced NREM and REM sleep (563, 1201). Disrupted body temperature regulation.
Median preoptic area Pharmacological: muscimol perfusion (1251) Prolonged waking state
Suprachiasmatic nucleus (SCN) Electrolytic: rat (1439). Loss of circadian rhythms. Reduced REM sleep during the rest (light) phase.
Dorsomedial hypothalamus (DMH) Neurotoxic: ibotenic acid (52, 224). Loss of circadian rhythms of sleep-wakefulness.
Posterior/lateral hypothalamus (PH/LH) Viral insult (1378) Hypersomnolence in human patients following influenza pandemic.
Orexin/hypocretin (perifornical hypothalamus; PFH) Damage to PH/LH including perifornical hypothalamus due to tumor (43) or stroke (1129). Narcolepsy.
Electrolytic/transection: (730, 840, 911, 1046) Reduction or abolition of cortical activation. Hypersomnolence for several days followed by recovery (cat).
Neurotoxic: PH/LH: no long-term effects (cat)
LH: hypocretin 2-saporin (411, 413) TMN area: minor changes.
Orexin KO or orexin receptor doubleknockouts (29, 214, 598, 640). Narcolepsy with cataplexy in mice. Unchanged 24 h wake amount but sleep-wake fragmentation, cataplexy, loss of circadian control of REM sleep. Reduced voluntary motor activity (wheel running).
Orexin receptor 2 mutations (727). Inherited narcolepsy in dogs.
Loss (degeneration) of >90% of orexin neurons and reduced CSF orexin (999, 1284). Idiopathic narcolepsy-cataplexy in humans.
Partial (33%) loss of orexin neurons (1285). Idiopathic narcolepsy without cataplexy in humans.
Mutation in preproorexin (999). Early onset narcolepsy in humans.
Orexin postnatal genetic (ataxin-3) lesion (96, 479) Narcolepsy with cataplexy in mice and rats.
Knockdown of orexin in PFH with siRNA (221). REM sleep during dark period in rats↑.
Orexin receptor 1 KO mice (640). Mild effects on sleep-wake. No cataplexy or sleep-onset REM episodes.
Orexin receptor 2 KO mice (1415). Milder form of narcolepsy-cataplexy (less cataplexy or sleep onset REM episodes).
Orexin receptor (1 and 2) antagonist (140). Increased sleep, especially REM sleep in rat, dogs, and humans. No cataplexy.
Melanin concentrating hormone (MCH) MCH knockout mice (5). NREM and REM sleep ↓.
Perifornical hypothalamus MCH 1 receptor antagonist (12)
Histamine (tuberomammillary nucleus) Reduced CSF histamine in narcolepsy and idiopathic hypersomnia (597). Excessive daytime sleepiness in humans.
HDC (synthetic enzyme) knockout mice (29, 978). No change in 24 h wake amount. Increased fragmentation. Decreased θ-power during waking increased δ during sleep. Increased REM during light period. Decreased sleep latency in novel environment.
α-FMH (histamine decarboxylase inhibitor) in cat (724), mice (978), and rat (551, 1152). Wake ↓ (cat, mice). No effect on 24 h values (rat).
Systemic H1R antagonists crossing the blood-brain barrier: human (1402), cat (724), mice (528). Reduced wakefulness and alertness ↓ (human, cat). No change (mice), decreased fragmentation.
H1R knockout mice (528) No change in 24 h wake amount or diurnal rhythms of sleep-wake. Decreased fragmentation.
Systemic H3R (autoreceptor) agonist in cat (725), rat (686, 885) Cat: wake ↓ NREM sleep↑
Rat: no effect.
Mammillary body (MB) Pharmacological inhibition: local anesthetic procaine (639). Abolition of hippocampal theta in urethane-anesthetized animals. Reduced frequency (1 Hz less) of hippocampal theta in awake animals.
Supramammillary nucleus (SuM)/posterior hypothalamus Pharmacological inhibition local anesthetic procaine (639). Abolition of hippocampal theta in urethane-anesthetized rats. Reduced frequency (1 Hz less) of hippocampal theta in awake rats.
Basal forebrain
Rostral basal forebrain (MS, vDB) Electrolytic lesions rabbits (30, 1090). Hippocampal theta rhythm reduced (neurotoxic) or abolished (electrolytic).
Neurotoxic lesions: rat: kainic acid (preferential loss of noncholinergic neurons) (1463), Orexin-saporin (415). No other change in sleep-wake.
Rostral BF cholinergic Pharmacological: AP5 (NMDA receptor antagonist) (104); muscimol (106); procaine(945). Reduced power of hippocampal theta.
Neurotoxic lesion IgG192 saporin or orexin-saporin (80, 415, 600, 697, 1463). Reduced amplitude of hippocampal theta rhythm and theta-gamma coupling. No change in sleep-wake.
Rostral BF GABAergic (mainly PV-Pos) Pharmacological inhibition of H-current with ZD7288 in rat (1343, 1446). Reduced hippocampal theta (1446) or minor effects (1343).
Caudal basal forebrain (SI, HDB, MCPO) Neurotoxic ibotenic acid or quisqualate (177, 611, 1064). No effect on 24 h sleep-wake. Increased delta power in all states. Reduced recovery sleep and delta power after ±SD.
Caudal BF cholinergic Pharmacological procaine (190), adenosine (1247). Increased sleep, delta wave activity.
IgG192-saporin (94, 102, 103, 592, 611). No or minor effects on baseline sleep-wake. Reduced EEG gamma. Reduced recovery sleep and delta power after sleep deprivation (611).
Caudal BF, TMN, LC Triple lesions using saporin-conjugated neurotoxins (101). No changes in daily amounts of wake. More sleep during light-to dark transition period. More stable sleep architecture.
Forebrain
Thalamus Electrolytic: monkey (1046). No effect on sleep-wake or EEG except abolition of high-voltage spindles (sharp-wave/ripples).
Neurotoxic ibotenic acid in rat (177, 397).
Basal ganglia Ibotenic acid lesion (1029). Rostral striatum:
Wake 15 %↓
Sleep fragmentation, slowing of EEG during waking (theta→delta).
Globus pall.: wake 46 % ↑ Increased fragmentation.
Slowing of EEG.
NAcc core: wake 27 % ↑ NREM bout duration ↓.
Slowing of EEG.
STN: minor changes.
SNr: minor changes.
Substantia nigra Hypocretin-2 saporin (412). Insomnia.
SN/VTA NMDA lesion (683). No decrease in wakefulness.
Neurotransmitters/neuromodulators (Systemic or icv effects)
Acetylcholine Systemic muscarinic antagonists (177, 555, 744). Increase in EEG delta waves. Increased high-voltage spindles (sharp waves/ ripples). Block of PGO waves.
M2/M4 double knockouts (434). No effect on sleep-wake
M3 receptor knockouts (434). REM 22% ↓
Rats reared on a diet lacking choline (1256). Reduced NREM and REM sleep
Serotonin Depletion of serotonin (363, 555, 582, 1080). Increased PGO waves in all states of sleep-wake.
Norepinephrine Dopamine-β-hydroxylase knockout mice (539, 956). Either no change in baseline sleep-wake or decrease in REM. Shorter sleep latency after mild stress.