Table 2.
Annotated genes involved in meiotic recombination. GenBank accession numbers are given for each gene annotated in the genome assembly of Brachionus calyciflorus and Brachionus manjavacas. The number of Brachionus plicatilis ESTs identified in NCBI database for each gene are listed. For the CP arthropod species Daphnia pulex (water flea) and Acyrthosiphon pisum (pea aphid), the copy number for each gene identified in genome assemblies (NCBI and JGI) are provided
| Gene | B. calyciflorus GenBank accession number | B. manjavacas GenBank accession number | B. plicatilis ESTs | D. pulex | A. pisum | ||
|---|---|---|---|---|---|---|---|
| SPO11 | JX156144 | JX156243 | 0 | 1 | 1 | ||
| MRE11 | JX156145 | JX156240, JX156267 | 0 | 1 | 1 | ||
| NBS1 | JX156146 | JX156244 | 0 | 1 | 1 | ||
| RAD50 | JX156147 | JX156245 | 8 | 1 | 1 | ||
| RAD51 | JX156129 | JX156246 | 6 | 1 | 1 | ||
| DMC1 | n.i. | n.i. | 0 | 0 | 0 | ||
| RAD51B | JX156130 | JX156247 | 2 | 1 | 0 | ||
| RAD51C | JX156131 | JX156248 | 4 | 1 | 1 | ||
| RAD51D | JX156132 | JX156249 | 0 | 1 | 1 | ||
| XRCC2 | JX156133 | JX156250 | 3 | 1 | 1 | ||
| XRCC3 | n.i. | n.i. | 0 | 0 | 1 | ||
| HOP2 | JX156122 | JX156251 | 8 | 1 | 1 | ||
| MND1 | JX156123 | JX156252 | 0 | 1 | 1 | ||
| RAD52 | n.i. | n.i. | 0 | 1 | 0 | ||
| RAD54 | JX156124 | JX156242, JX156268 | 4 | 1 | 1 | ||
| RAD54B | n.i. | n.i. | 0 | 1 | 1 | ||
| MLH1 | JX156125 | JX156253 | 2 | 1 | 1 | ||
| PMS1 | n.i. | n.i. | 0 | 1 | 1 | ||
| MLH3 | JX156117, JX156137 | JX156254 | 1 | 1 | 0 | ||
| PMS2 | JX156126 | JX156241, JX156269 | 1 | 1 | 1 | ||
| MER3 | JX156127 | JX156255 | 0 | 0 | 1 | ||
| MSH2 | JX156118 | JX156256 | 0 | 1 | 1 | ||
| MSH3 | n.i. | n.i. | 0 | 1 | 0 | ||
| MSH4 | JX156119 | JX156257 | 0 | 1 | 1 | ||
| MSH5 | JX156120 | JX156258 | 0 | 1 | 1 | ||
| MSH6 | JX156121 | JX156259 | 3 | 1 | 1 | ||
| RECQ1 | JX156134, JX156139 | JX156260 | 1 | 1 | 1 | ||
| RECQ2 | A | JX156140 | A | JX156261 | 2 | 7 | 3 |
| B | JX156135, JX156142 | B | JX156262 | ||||
| RECQ3 | n.i. | n.i. | 0 | 0 | 1 | ||
| RECQ4 | JX156136, JX156143 | JX156263 | 0 | 1 | 1 | ||
| RECQ5 | JX156141 | JX156264 | 0 | 1 | 1 | ||
| ERCC4 | JX156116, JX156138 | JX156265 | 1 | 1 | 1 | ||
| MUS81 | JX156128 | JX156266 | 1 | 1 | 1 | ||
n.i. = not identified in genome assembly.