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. 2013 Apr 10;14(Suppl 5):S4. doi: 10.1186/1471-2105-14-S5-S4

Figure 1.

Figure 1

Example graphical model for a tree-structured HMM with three cell types. Hidden state variables representing chromatin states (white) are connected horizontally in a chain as well as vertically in a tree structure. Each chain in the graph represents a certain cell type. For example, the top chain represents the root cell type (e.g., ES cells). Observed nodes (grey) represent chromatin modifications and are connected only to the hidden variables.