Table 1.

Correlation coefficients of DE and DS scores and experiment statistics of the four data sets.

Data Set	Corr. Coef.	P-value	Sample Size	Platform	SE/PE	Strand Specific	Read Length	Frag. Size	Tissue
Artificial	0.23	0	10 v 9	GAII	-	-	-	-	-
Cancer	0.05	0	20 v 10	GAII	PE	No	36	200-300	Prostate
BA46	-0.007	0.17	20 v 20	SOLiD v4	SE	Yes	50	200-300	Brain (BA46)
BA22	-0.033	3.4e-9	9 v 9	GAII	SE	No	76	200-250	Brain (BA22)