Table 2.
Dataset | GS | DS | 0.1 | 0.2 | 0.3 | 0.4 | 0.5 | 0.6 | 0.7 | 0.8 | 0.9 | DE |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Artificial | c2 | 1550 | 982 | 1389 | 1656 | 1773 | 1757 | 1569 | 1247 | 696 | 261 | 64 |
c5 | 647 | 326 | 479 | 681 | 766 | 747 | 675 | 558 | 354 | 158 | 66 | |
Cancer | c2 | 4 | 3 | 4 | 10 | 14 | 16 | 16 | 16 | 14 | 12 | 12 |
c5 | 11 | 11 | 20 | 14 | 13 | 9 | 6 | 2 | 2 | 1 | 1 | |
BA46 | c2 | 0 | 1 | 1 | 2 | 3 | 3 | 2 | 4 | 3 | 2 | 2 |
c5 | 0 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 1 | 0 | |
BA22 | c2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
c5 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 0 |
For the full results, see Supplementary Tables S1-S4.
GS: gene set category; DS: DS-only GSEA; DE: DE-only GSEA; 0.1,...,0.9: weights α.