Table 2.
Sequences of synthetic DNA fragments used in this study
DNA fragment | Sequencea |
---|---|
D301A | CCCGGGTGATCCCCAACGGCATCGCCCTCGATGCCTGGACCGGCGCCCTCGAACGGCGGCCGCCGGGGATTCCGCCGGTGGTCGGGCTGGTCGGCCGGGTAGTGCCGATCAAGGACGTGAAGACCTTCATCCGCGCCATGCGCGGGGTGGTCAGCGCGATGCCGGAGGCGGAGGGCTGGATCGTCGGTCCGGAGGAGGAAGATCCGGACTATGCCAGCGAATGCCGCAGCCTGGTGGCCAGCCTCGGCCTGCAG |
D360A | CCCGGGTGATCCCCAACGGCATCGACCTCGATGCCTGGACCGGCGCCCTCGAACGGCGGCCGCCGGGGATTCCGCCGGTGGTCGGGCTGGTCGGCCGGGTAGTGCCGATCAAGGACGTGAAGACCTTCATCCGCGCCATGCGCGGGGTGGTCAGCGCGATGCCGGAGGCGGAGGGCTGGATCGTCGGTCCGGAGGAGGAAGCTCCGGACTATGCCAGCGAATGCCGCAGCCTGGTGGCCAGCCTCGGCCTGCAG |
R325A | CCCGGGTGATCCCCAACGGCATCGATCTCGACGCCTGGACCGGCGCCCTCGAACGGCGGCCGCCGGGGATTCCGCCGGTGGTCGGGCTGGTCGGCGCCGTAGTGCCGATCAAGGATGTGAAGACCTTCATCCGCGCCATGCGCGGTGTGGTCAGCGCGATGCCGGAGGCGGAAGGCTGGATCGTCGGTCCGGAGGAGGAAGACCCGGACTATGCCAGCGAATGCCGCAGCCTGGTGGCCAGCCTCGGCCTGCAG |
K330A | CCCGGGTGATCCCCAACGGCATCGATCTCGACGCCTGGACCGGCGCCCTCGAACGGCGGCCGCCGGGGATTCCGCCGGTGGTCGGGCTGGTCGGCCGGGTAGTGCCGATCGCCGATGTGAAGACCTTCATCCGCGCCATGCGCGGTGTGGTCAGCGCGATGCCGGAGGCGGAAGGCTGGATCGTCGGTCCGGAGGAGGAAGACCCGGACTATGCCAGCGAATGCCGCAGCCTGGTGGCCAGCCTCGGCCTGCAG |
K333A | CCCGGGTGATCCCCAACGGCATCGATCTCGACGCCTGGACCGGCGCCCTCGAACGGCGGCCGCCGGGGATTCCGCCGGTGGTCGGGCTGGTCGGCCGGGTAGTGCCGATCAAGGATGTGGCCACCTTCATCCGCGCCATGCGCGGTGTGGTCAGCGCGATGCCGGAGGCGGAAGGCTGGATCGTCGGTCCGGAGGAGGAAGACCCGGACTATGCCAGCGAATGCCGCAGCCTGGTGGCCAGCCTCGGCCTGCAG |
Underlined and italicized nucleotides indicate PstI and SmaI restriction sites; underlined nucleotides indicate changes to introduce site-directed mutations; italicized and boldface nucleotides indicate silent mutations introduced to adjust the CG content, which was problematic during DNA synthesis; boldface nucleotides indicate silent mutations introduced to add a new restriction site, i.e., ClaI.